CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold491-EXSNAP2012.2
(
Pristionchus exspectatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
scaffold491-EXSNAP2012.2
T197783_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold491-EXSNAP2012.2
GATA
313
347
CANCGTRETTLWRRSDEGEIECNSCSLYYRKRGVK
Links
Other
GATA
family TFs
Other
Pristionchus exspectatus
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA00214
Pristionchus pacificus
PPA00214
N
0.867
GPUH_0000349001
Gongylonema pulchrum
GPUH_0000349001
N
0.828
EEL_0000313301
Elaeophora elaphi
EEL_0000313301
N
0.828
nDi.2.2.2.g04767
Dirofilaria immitis
nDi.2.2.2.g04767
N
0.823
nAv.1.0.1.g01539
Acanthocheilonema viteae
nAv.1.0.1.g01539
N
0.823
nLs.2.1.2.g00174
Litomosoides sigmodontis
nLs.2.1.2.g00174
N
0.823
nOo.2.0.1.g12737
Onchocerca ochengi
nOo.2.0.1.g12737
N
0.823
TCLT_0000041401
Thelazia callipaeda
TCLT_0000041401
N
0.823
OFLC_0001184401
Onchocerca flexuosa
OFLC_0001184401
N
0.823
LOAG_15758
Loa loa
LOAG_15758
N
0.823
Bm4554
Brugia malayi
Bm4554
N
0.823
WBGene00239063
Onchocerca volvulus
WBGene00239063
N
0.823
BTMF_0000886001
Brugia timori
BTMF_0000886001
N
0.823
WUBG_04546
Wuchereria bancrofti
WUBG_04546
N
0.823
ASIM_0001286201
Anisakis simplex
ASIM_0001286201
N
0.814
ASU_12315
Ascaris suum
ASU_12315
N
0.810
TCNE_0001731101
Toxocara canis
TCNE_0001731101
N
0.810
L892_g2112
Steinernema scapterisci
L892_g2112
N
0.808