CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0001364401
(
Schistosoma mattheei
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
SMTD_0001364401
T197797_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0001364401-mRNA-1
GATA
330
362
SLNSPQWYAWGPSNANSRLCTDCWSYWKRYGGL
Links
Other
GATA
family TFs
Other
Schistosoma mattheei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRE_0001164501
Trichobilharzia regenti
TRE_0001164501
N
0.843
SROB_0001700901
Schistosoma rodhaini
SROB_0001700901
N
0.836
SMRZ_0001319101
Schistosoma margrebowiei
SMRZ_0001319101
N
0.836
SCUD_0002209801
Schistosoma curassoni
SCUD_0002209801
N
0.836
Smp_168850
Schistosoma mansoni
Smp_168850
N
0.836
A_02839
Schistosoma haematobium
A_02839
N
0.836
csin112927
Clonorchis sinensis
csin112927
N
0.827
T265_03747
Opisthorchis viverrini
T265_03747
N
0.827