CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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19874_YOL116W
(
Saccharomyces paradoxus
)
GCR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF12550 (GCR1_C)
IPR022210
19874_YOL116W
T198740_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSN1
M00913_2.00
Saccharomyces cerevisiae
NWWTGTCCHN
NDGGACAWWN
PBM
Gordan et al.(2011)
Msn1
1.000
1.000
MSN1
M08567_2.00
Saccharomyces cerevisiae
GTCCNHAT
ATDNGGAC
Misc
DeBoer et al.(2011)
YOL116W_1376
1.000
1.000
MSN1
M08568_2.00
Saccharomyces cerevisiae
HATGTCCH
DGGACATD
Misc
DeBoer et al.(2011)
YOL116W_1378
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
19874_YOL116W
GCR1
277
355
FEFIKSPHSVMEVWKEYTEGVNGQPSIRKMEALYQTAWRRDPAVNKRYSRRKVLWKAIQTGLNRGYSLNYVVEILENSR
Links
Other
GCR1
family TFs
Other
Saccharomyces paradoxus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy