CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA033939
(
Oryza indica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BGIOSGA033939
T199891_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA033939-PA
GRAS
13
54
LVHLLLACADLVSKGDHPAALRHLHLLRRVASPLGDSMQRAI
BGIOSGA033939-PA
GRAS
51
317
QRAIFEAFHGEDRVHVVDLDILQGYQWPAFLQALAARPGGPPTLRLTGVGHPPAAVRETGRHLASLAASLRVPFEFHAAAADRLERLRPAALHRRVGEALAVNAVNRLHRVPSSHLPPLLSMIRDQAPKIITLVEQEAAHNGPYFLGRFLEALHYYSAIFDSLDATFPAESTARMKVEQCLLAPEIRNVVACEGAERVARHERLERWRRLMEGRGFEAVPLSAAAVGQSQVLLGLYGAGDGYRLTEDSGCLLLGWQDRAIIAASAWR
Links
Other
GRAS
family TFs
Other
Oryza indica
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI11G15600
Oryza rufipogon
ORUFI11G15600
N
0.987
ORGLA11G0124900
Oryza glaberrima
ORGLA11G0124900
N
0.857
OBART11G14550
Oryza barthii
OBART11G14550
N
0.857
ONIVA11G13990
Oryza nivara
ONIVA11G13990
N
0.857
OGLUM11G14080
Oryza glumaepatula
OGLUM11G14080
N
0.851
OPUNC11G12230
Oryza punctata
OPUNC11G12230
N
0.838
GSMUA_Achr6G20830_001
Musa acuminata
GSMUA_Achr6G20830_001
N
0.818
Sb05g018070
Sorghum bicolor
Sb05g018070
N
0.805
Pavir.J25769
Panicum virgatum
Pavir.J25769
N
0.802
GRMZM2G342217
Zea mays
GRMZM2G342217
N
0.802
Si027708m.g
Setaria italica
Si027708m.g
N
0.802
BRADI4G18390
Brachypodium distachyon
BRADI4G18390
N
0.795
LPERR11G11520
Leersia perrieri
LPERR11G11520
N
0.792
Traes_2BS_D32231DB0
Triticum aestivum
Traes_2BS_D32231DB0
N
0.786