CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra036041
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra036041
T200009_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra036041.1-P
GRAS
29
416
MEQLLLHCATAIDSNDAALAHQLLWVLNNIASPDGDSSTQRLTSAFVRALLSRAVSKIPTLFSTFGNTVFQPPADEIHRFSVVELAGFIDLTPWHRFGFIAANEAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMATKLNKPPLLKLTVVSSASNFPPFINISYEDLGSKLVNFATSRNIEMQFTIIPSTYSDGFSSLLQHLRMYPTSYNEALVVNCHMMLRYIPDETLTPSSPSSLSLRNVFLNQLRSLNPTMVTLIEEDADLTSENLVTRLRSAFNYFWIPFDTTDTFMSEQRRLYEAEISWKIENVVAKEGVERVERTETKGRWLERMRDNDFGGVRVREEAVSDLKAMLGEHAVGWGMKKDDDDESLVLTWKGHSVVFATVWV
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo8g079250
Brassica oleracea
Bo8g079250
N
0.973
Thhalv10010981m.g
Eutrema salsugineum
Thhalv10010981m.g
N
0.865
Carubv10017361m.g
Capsella rubella
Carubv10017361m.g
N
0.827
Cagra.25155s0006
Capsella grandiflora
Cagra.25155s0006
N
0.827
SCL32
Arabidopsis thaliana
AT3G49950
N
0.824
Bostr.6864s0245
Boechera stricta
Bostr.6864s0245
N
0.805
fgenesh1_pg.C_scaffold_5001499
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5001499
N
0.791