POPTR_0003s11020 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0003s11020 T201182_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s11020.1 GRAS 390 752

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0001s00480 Populus trichocarpa POPTR_0001s00480 N 0.942
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N 0.928
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N 0.900
cassava30062.valid.m1 Manihot esculenta cassava30062.valid.m1 N 0.873
29916.m000544 Ricinus communis 29916.m000544 N 0.856
Lus10004353.g Linum usitatissimum Lus10004353.g N 0.856
Lus10028934.g Linum usitatissimum Lus10028934.g N 0.845
Pm023512 Prunus mume Pm023512 N 0.823
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N 0.820
evm.TU.supercontig_29.139 Carica papaya evm.TU.supercontig_29.139 N 0.820
PRUPE_ppa001561mg Prunus persica PRUPE_ppa001561mg N 0.820
Cla005738 Citrullus lanatus Cla005738 N 0.816
Cucsa.320850 Cucumis sativus Cucsa.320850 N 0.806
MDP0000275704 Malus domestica MDP0000275704 N 0.796
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N 0.792
PK22905.1 Cannabis sativa PK22905.1 N 0.789
TCM_015991 Theobroma cacao TCM_015991 N 0.778
orange1.1g042460m.g Citrus sinensis orange1.1g042460m.g N 0.762
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N 0.762
VIT_02s0154g00400 Vitis vinifera VIT_02s0154g00400 N 0.745
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N 0.729