TCM_002319 (Theobroma cacao)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 TCM_002319 T201601_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOX93442 GRAS 199 569
EOX93443 GRAS 156 526
EOX93444 GRAS 156 526
EOX93445 GRAS 156 526

Links

Other GRAS family TFs
Other Theobroma cacao TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.721
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.805
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.797
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.734
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.837
mgf013039m Mimulus guttatus mgf013039m N 0.707
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.832
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.791
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.758
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.734
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.821
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.729
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.827
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.726
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.810
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.816
29949.m000124 Ricinus communis 29949.m000124 N 0.878
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.707
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.702
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N 0.702
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.726
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.908
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.816
Ca_09786 Cicer arietinum Ca_09786 N 0.870
Ca_13855 Cicer arietinum Ca_13855 N 0.710
Cla001429 Citrullus lanatus Cla001429 N 0.846
Cla004565 Citrullus lanatus Cla004565 N 0.756
Pm012019 Prunus mume Pm012019 N 0.802
Pm015021 Prunus mume Pm015021 N 0.897
27613.m000642 Ricinus communis 27613.m000642 N 0.816
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.726
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.732
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.827
MDP0000205236 Malus domestica MDP0000205236 N 0.778
MDP0000284679 Malus domestica MDP0000284679 N 0.778
MDP0000804652 Malus domestica MDP0000804652 N 0.889
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.875
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.710
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.705
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.802
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.902
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.734
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.813
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.726
PK09018.1 Cannabis sativa PK09018.1 N 0.835
PK15082.1 Cannabis sativa PK15082.1 N 0.748
MDP0000152670 Malus domestica MDP0000152670 N 0.892
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.778
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.843
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.780
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.867
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.843
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.753
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.762
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.886
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.789
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.900
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.957
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.778
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.940
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.786
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.813
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.762
TCM_030733 Theobroma cacao TCM_030733 N 0.802
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.753
F775_28371 Aegilops tauschii F775_28371 N 0.705
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.740
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.713
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.883
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.886
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.707
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.705
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.705
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.702
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.713
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.707
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.702
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.873
F775_15940 Aegilops tauschii F775_15940 N 0.705
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.724
Bra037509 Brassica rapa Bra037509 N 0.770
SCL5 Arabidopsis thaliana AT1G50600 N 0.740
SCL21 Arabidopsis thaliana AT2G04890 N 0.745
PAT1 Arabidopsis thaliana AT5G48150 N 0.835
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.713
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.715
Bo2g149670 Brassica oleracea Bo2g149670 N 0.818
Bo6g022330 Brassica oleracea Bo6g022330 N 0.734
Bo7g030310 Brassica oleracea Bo7g030310 N 0.734
Bo7g089080 Brassica oleracea Bo7g089080 N 0.797
Bo9g009260 Brassica oleracea Bo9g009260 N 0.813
Bra018860 Brassica rapa Bra018860 N 0.734
Bra020715 Brassica rapa Bra020715 N 0.821
Bra036185 Brassica rapa Bra036185 N 0.813
OB07G25870 Oryza brachyantha OB07G25870 N 0.710
OB10G15940 Oryza brachyantha OB10G15940 N 0.707
OBART07G20130 Oryza barthii OBART07G20130 N 0.710
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.764
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.794
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.900
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.900
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.775
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.702
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.753
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.821
Si029418m.g Setaria italica Si029418m.g N 0.705
Si035052m.g Setaria italica Si035052m.g N 0.705
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.846
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.770
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.846
CIGR2 Oryza sativa OS07G0583600 N 0.713
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.718
OBART10G07700 Oryza barthii OBART10G07700 N 0.718
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.713
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.718
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.715
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.715
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.721
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.713
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.713
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.715
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.713
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.713
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.718
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.713
TCM_030393 Theobroma cacao TCM_030393 N 0.713