TCM_040833 (Theobroma cacao)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 TCM_040833 T201632_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY32806 GRAS 45 467

Links

Other GRAS family TFs
Other Theobroma cacao TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.839
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.733
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.861
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.782
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.762
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.825
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.781
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.860
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.779
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.781
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.772
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.781
mgf022906m Mimulus guttatus mgf022906m N 0.746
mgf008315m Mimulus guttatus mgf008315m N 0.741
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.741
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.784
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.845
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.921
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.798
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.782
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.844
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.792
PK02707.1 Cannabis sativa PK02707.1 N 0.751
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.779
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.799
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.784
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.844
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.787
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.860
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.790
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.732
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.730
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.761
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.705
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.768
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.823
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.783
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.838
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.784
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.792
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.781
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.816
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.833
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.795
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.795
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.811
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.756
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.765
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.770
Bra018848 Brassica rapa Bra018848 N 0.765
Bra014251 Brassica rapa Bra014251 N 0.775
Bo6g022200 Brassica oleracea Bo6g022200 N 0.751
Bo5g078760 Brassica oleracea Bo5g078760 N 0.762
Bo3g179450 Brassica oleracea Bo3g179450 N 0.770
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.858
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.864
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.781
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.813
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.813
30131.m007244 Ricinus communis 30131.m007244 N 0.795
30024.m001746 Ricinus communis 30024.m001746 N 0.863
Pm029840 Prunus mume Pm029840 N 0.781
Pm016466 Prunus mume Pm016466 N 0.781
Pm012190 Prunus mume Pm012190 N 0.869
Cla020893 Citrullus lanatus Cla020893 N 0.732
Cla006433 Citrullus lanatus Cla006433 N 0.798
Ca_27441 Cicer arietinum Ca_27441 N 0.836
Ca_11133 Cicer arietinum Ca_11133 N 0.830
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.790
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.847
TCM_042392 Theobroma cacao TCM_042392 N 0.806
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.811
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.777
SCL3 Arabidopsis thaliana AT1G50420 N 0.773