SCL5 (Vitis vinifera)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 VIT_19s0090g01740 T201855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_19s0090g01740.t01 GRAS 175 545

Links

Other GRAS family TFs
Other Vitis vinifera TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.724
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.745
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.786
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.729
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.701
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.753
SCL5 Arabidopsis thaliana AT1G50600 N 0.729
PAT1 Arabidopsis thaliana AT5G48150 N 0.767
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.756
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.706
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.729
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.705
Bo2g149670 Brassica oleracea Bo2g149670 N 0.743
Bo6g022330 Brassica oleracea Bo6g022330 N 0.726
Bo7g089080 Brassica oleracea Bo7g089080 N 0.737
Bo9g009260 Brassica oleracea Bo9g009260 N 0.743
Bra037509 Brassica rapa Bra037509 N 0.715
Bra018860 Brassica rapa Bra018860 N 0.726
Bra020715 Brassica rapa Bra020715 N 0.740
Bra026077 Brassica rapa Bra026077 N 0.723
Bra036185 Brassica rapa Bra036185 N 0.743
PK15082.1 Cannabis sativa PK15082.1 N 0.764
PK09018.1 Cannabis sativa PK09018.1 N 0.789
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.759
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.721
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.721
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.759
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.802
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.778
Ca_13855 Cicer arietinum Ca_13855 N 0.732
Ca_09786 Cicer arietinum Ca_09786 N 0.802
Cla004565 Citrullus lanatus Cla004565 N 0.726
Cla001429 Citrullus lanatus Cla001429 N 0.786
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.767
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.767
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.772
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.775
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.724
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.753
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.783
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.740
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.718
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.786
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.824
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.715
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.715
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.797
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.707
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.712
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.802
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.718
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.783
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.816
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.810
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.778
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.743
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.765
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.780
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.779
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.710
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.734
MDP0000152670 Malus domestica MDP0000152670 N 0.813
MDP0000205236 Malus domestica MDP0000205236 N 0.808
MDP0000804652 Malus domestica MDP0000804652 N 0.813
MDP0000284679 Malus domestica MDP0000284679 N 0.808
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.718
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.808
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.743
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.829
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.799
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.713
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.710
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.722
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.709
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.702
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.729
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.772
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.810
Pm015021 Prunus mume Pm015021 N 0.816
Pm012019 Prunus mume Pm012019 N 0.824
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.816
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.791
29949.m000124 Ricinus communis 29949.m000124 N 0.791
27613.m000642 Ricinus communis 27613.m000642 N 0.818
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.780
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.808
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.780
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.762
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.780
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.753
TCM_002319 Theobroma cacao TCM_002319 N 0.816
TCM_030733 Theobroma cacao TCM_030733 N 0.813
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.827