Pm012190 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm012190 T201965_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm012190 GRAS 46 468

Links

Other GRAS family TFs
Other Prunus mume TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.817
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.771
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.747
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.790
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.771
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.835
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.757
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.760
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.753
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.755
mgf022906m Mimulus guttatus mgf022906m N 0.738
mgf008315m Mimulus guttatus mgf008315m N 0.725
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.738
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.790
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.831
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.763
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.837
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.719
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.847
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.817
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.802
PK02707.1 Cannabis sativa PK02707.1 N 0.744
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.752
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.775
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.757
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.808
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.774
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.837
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.779
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.766
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.785
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.791
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.749
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.771
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.822
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.791
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.791
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.763
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.755
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.789
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.817
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.781
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.787
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.798
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.745
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.755
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.752
Bra018848 Brassica rapa Bra018848 N 0.744
Bra014251 Brassica rapa Bra014251 N 0.756
Bo6g022200 Brassica oleracea Bo6g022200 N 0.729
Bo5g078760 Brassica oleracea Bo5g078760 N 0.750
Bo3g179450 Brassica oleracea Bo3g179450 N 0.749
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.774
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.819
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.997
30131.m007244 Ricinus communis 30131.m007244 N 0.779
30024.m001746 Ricinus communis 30024.m001746 N 0.830
Pm029840 Prunus mume Pm029840 N 0.736
Pm016466 Prunus mume Pm016466 N 0.736
Cla020893 Citrullus lanatus Cla020893 N 0.725
Cla006433 Citrullus lanatus Cla006433 N 0.809
Ca_27441 Cicer arietinum Ca_27441 N 0.830
Ca_11133 Cicer arietinum Ca_11133 N 0.810
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.771
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.834
TCM_042392 Theobroma cacao TCM_042392 N 0.768
TCM_040833 Theobroma cacao TCM_040833 N 0.869
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.786
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.752
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.736
SCL3 Arabidopsis thaliana AT1G50420 N 0.760