Cucsa.120390 (Cucumis sativus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cucsa.120390 T202129_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.120390.1 GRAS 175 545
Cucsa.120390.2 GRAS 175 545
Cucsa.120390.3 GRAS 175 545
Cucsa.120390.4 GRAS 175 545

Links

Other GRAS family TFs
Other Cucumis sativus TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.791
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.702
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.720
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.805
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.734
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.813
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.821
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.713
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.737
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.843
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.702
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.805
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.720
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.812
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.778
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.823
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.783
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.756
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.734
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.707
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.789
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.756
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.846
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.848
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.764
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.846
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.725
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.768
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.702
PK09018.1 Cannabis sativa PK09018.1 N 0.799
PK15082.1 Cannabis sativa PK15082.1 N 0.702
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.705
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.727
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.813
MDP0000804652 Malus domestica MDP0000804652 N 0.848
MDP0000284679 Malus domestica MDP0000284679 N 0.751
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.745
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.840
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.732
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.772
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.804
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.805
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.757
MDP0000152670 Malus domestica MDP0000152670 N 0.843
MDP0000205236 Malus domestica MDP0000205236 N 0.751
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.724
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.740
Bra026077 Brassica rapa Bra026077 N 0.712
Bra036185 Brassica rapa Bra036185 N 0.813
Bra037509 Brassica rapa Bra037509 N 0.767
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.710
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.702
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.848
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.706
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.846
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.702
Bra020715 Brassica rapa Bra020715 N 0.799
Bra018860 Brassica rapa Bra018860 N 0.710
Bra015156 Brassica rapa Bra015156 N 0.723
SCL5 Arabidopsis thaliana AT1G50600 N 0.710
SCL21 Arabidopsis thaliana AT2G04890 N 0.724
PAT1 Arabidopsis thaliana AT5G48150 N 0.808
Bo2g149670 Brassica oleracea Bo2g149670 N 0.799
Bo6g022330 Brassica oleracea Bo6g022330 N 0.710
Bo7g030310 Brassica oleracea Bo7g030310 N 0.717
Bo7g089080 Brassica oleracea Bo7g089080 N 0.776
Bo9g009240 Brassica oleracea Bo9g009240 N 0.830
Bo9g009260 Brassica oleracea Bo9g009260 N 0.824
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.702
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.840
CIGR2 Oryza sativa OS07G0583600 N 0.713
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.707
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.851
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.775
Ca_09786 Cicer arietinum Ca_09786 N 0.827
Ca_13855 Cicer arietinum Ca_13855 N 0.705
Cla001429 Citrullus lanatus Cla001429 N 0.973
Pm012019 Prunus mume Pm012019 N 0.745
Pm015021 Prunus mume Pm015021 N 0.848
27613.m000642 Ricinus communis 27613.m000642 N 0.789
TCM_030733 Theobroma cacao TCM_030733 N 0.780
TCM_002319 Theobroma cacao TCM_002319 N 0.837
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.748
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.816
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.740
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.762
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.843
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.851
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.729
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.731
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.794
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.816
29949.m000124 Ricinus communis 29949.m000124 N 0.821