Carubv10015685m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10015685m.g T202355_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10015685m GRAS 42 405

Links

Other GRAS family TFs
Other Capsella rubella TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.717
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.723
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.956
SCL21 Arabidopsis thaliana AT2G04890 N 0.951
PAT1 Arabidopsis thaliana AT5G48150 N 0.728
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.953
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.723
Bo7g089080 Brassica oleracea Bo7g089080 N 0.712
Bo9g009240 Brassica oleracea Bo9g009240 N 0.730
Bo9g009260 Brassica oleracea Bo9g009260 N 0.718
Bo7g030310 Brassica oleracea Bo7g030310 N 0.890
Bo2g149670 Brassica oleracea Bo2g149670 N 0.724
Bra036185 Brassica rapa Bra036185 N 0.713
Bra020715 Brassica rapa Bra020715 N 0.734
Bra015156 Brassica rapa Bra015156 N 0.862
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.721
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.978
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.721
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.732
Ca_09786 Cicer arietinum Ca_09786 N 0.721
Cla001429 Citrullus lanatus Cla001429 N 0.707
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.721
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.721
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.720
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.720
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.915
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.723
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.742
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.739
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.737
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.740
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.716
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.714
MDP0000804652 Malus domestica MDP0000804652 N 0.714
MDP0000152670 Malus domestica MDP0000152670 N 0.709
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.729
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.739
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.732
Pm015021 Prunus mume Pm015021 N 0.707
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.710
29949.m000124 Ricinus communis 29949.m000124 N 0.734
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.747
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.707
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.707
TCM_002319 Theobroma cacao TCM_002319 N 0.732
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.736