Ciclev10014845m.g (Citrus clementina)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Ciclev10014845m.g T202393_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10014845m GRAS 166 536

Links

Other GRAS family TFs
Other Citrus clementina TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27613.m000642 Ricinus communis 27613.m000642 N 0.783
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.775
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.721
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.789
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.702
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.702
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.721
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.789
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.743
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.824
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.707
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.753
29949.m000124 Ricinus communis 29949.m000124 N 0.764
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.791
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.759
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.786
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.753
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.813
mgf013039m Mimulus guttatus mgf013039m N 0.702
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.791
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.753
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.721
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.732
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.851
MDP0000284679 Malus domestica MDP0000284679 N 0.753
MDP0000804652 Malus domestica MDP0000804652 N 0.846
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.989
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.770
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.865
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.724
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.762
PK09018.1 Cannabis sativa PK09018.1 N 0.808
PK15082.1 Cannabis sativa PK15082.1 N 0.715
MDP0000205236 Malus domestica MDP0000205236 N 0.753
MDP0000152670 Malus domestica MDP0000152670 N 0.851
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.764
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.859
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.862
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.740
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.859
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.770
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.775
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.810
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.740
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.751
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.721
Bra036185 Brassica rapa Bra036185 N 0.770
Bra037509 Brassica rapa Bra037509 N 0.726
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.713
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.854
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.854
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.837
OBART10G07700 Oryza barthii OBART10G07700 N 0.707
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.707
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.705
Bra020715 Brassica rapa Bra020715 N 0.775
Bra018860 Brassica rapa Bra018860 N 0.707
SCL5 Arabidopsis thaliana AT1G50600 N 0.710
SCL21 Arabidopsis thaliana AT2G04890 N 0.732
PAT1 Arabidopsis thaliana AT5G48150 N 0.786
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.705
Bo2g149670 Brassica oleracea Bo2g149670 N 0.775
Bo6g022330 Brassica oleracea Bo6g022330 N 0.707
Bo7g030310 Brassica oleracea Bo7g030310 N 0.729
Bo7g089080 Brassica oleracea Bo7g089080 N 0.751
Bo9g009260 Brassica oleracea Bo9g009260 N 0.772
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.710
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.702
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.707
TCM_002319 Theobroma cacao TCM_002319 N 0.867
TCM_030733 Theobroma cacao TCM_030733 N 0.767
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.707
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.846
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.767
Ca_09786 Cicer arietinum Ca_09786 N 0.829
Cla001429 Citrullus lanatus Cla001429 N 0.824
Cla004565 Citrullus lanatus Cla004565 N 0.702
Pm012019 Prunus mume Pm012019 N 0.764
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.745
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.827
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.707
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.829
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.740
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.759
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.862
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.856
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.745
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.732
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.772
Pm015021 Prunus mume Pm015021 N 0.851