Pavir.Ga00626 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ga00626 T202995_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga00626.1.p GRAS 165 534

Links

Other GRAS family TFs
Other Panicum virgatum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si009601m.g Setaria italica Si009601m.g N 0.945
Pavir.Gb01009 Panicum virgatum Pavir.Gb01009 N 0.921
GRMZM2G173429 Zea mays GRMZM2G173429 N 0.852
Sb06g026240 Sorghum bicolor Sb06g026240 N 0.828
GRMZM2G109869 Zea mays GRMZM2G109869 N 0.822
LPERR04G18520 Leersia perrieri LPERR04G18520 N 0.803
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N 0.801
OPUNC04G20350 Oryza punctata OPUNC04G20350 N 0.792
OMERI04G19030 Oryza meridionalis OMERI04G19030 N 0.789
MLOC_72117 Hordeum vulgare MLOC_72117 N 0.781
OS04G0580300 Oryza sativa OS04G0580300 N 0.780
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N 0.780
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N 0.780
ONIVA04G21910 Oryza nivara ONIVA04G21910 N 0.780
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N 0.780
BGIOSGA014504 Oryza indica BGIOSGA014504 N 0.780
OB04G29620 Oryza brachyantha OB04G29620 N 0.773
Traes_2BL_46E59998A1 Triticum aestivum Traes_2BL_46E59998A1 N 0.754
Si016627m.g Setaria italica Si016627m.g N 0.727
OBART02G28020 Oryza barthii OBART02G28020 N 0.713
OS02G0681900 Oryza sativa OS02G0681900 N 0.713
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N 0.713
ORUFI02G29540 Oryza rufipogon ORUFI02G29540 N 0.713
OMERI02G27200 Oryza meridionalis OMERI02G27200 N 0.713
Pavir.J39953 Panicum virgatum Pavir.J39953 N 0.710
OPUNC02G25720 Oryza punctata OPUNC02G25720 N 0.710
ONIVA02G31120 Oryza nivara ONIVA02G31120 N 0.710
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N 0.710
BGIOSGA005839 Oryza indica BGIOSGA005839 N 0.710