Pavir.Ib02999 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ib02999 T203033_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib02999.1.p GRAS 173 543
Pavir.Ib02999.2.p GRAS 173 543
Pavir.Ib02999.3.p GRAS 173 543

Links

Other GRAS family TFs
Other Panicum virgatum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.984
Si035052m.g Setaria italica Si035052m.g N 0.962
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.932
OB10G15940 Oryza brachyantha OB10G15940 N 0.883
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.883
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.881
OBART10G07700 Oryza barthii OBART10G07700 N 0.875
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.875
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.875
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.875
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.875
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.873
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.873
F775_26780 Aegilops tauschii F775_26780 N 0.873
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.873
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.870
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.870
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.865
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.862
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.862
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.846
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.827
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.821
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.818
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.813
OS03G0193000 Oryza sativa OS03G0193000 N 0.812
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.812
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.812
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.812
BGIOSGA012030 Oryza indica BGIOSGA012030 N 0.812
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.810
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.808
OBART03G06740 Oryza barthii OBART03G06740 N 0.808
OB03G16920 Oryza brachyantha OB03G16920 N 0.805
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.803
Si035089m.g Setaria italica Si035089m.g N 0.802
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.802
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.797
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.797
F775_08653 Aegilops tauschii F775_08653 N 0.797
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.795
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.794
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.789
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.789
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.783
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.783