Thhalv10004053m.g (Eutrema salsugineum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Thhalv10004053m.g T203189_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004051m GRAS 131 502
Thhalv10004053m GRAS 131 502

Links

Other GRAS family TFs
Other Eutrema salsugineum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.711
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.749
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.724
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.951
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.720
SCL21 Arabidopsis thaliana AT2G04890 N 0.711
PAT1 Arabidopsis thaliana AT5G48150 N 0.938
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.922
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.720
Bo2g149670 Brassica oleracea Bo2g149670 N 0.924
Bo7g089080 Brassica oleracea Bo7g089080 N 0.919
Bo7g030310 Brassica oleracea Bo7g030310 N 0.700
Bo9g009240 Brassica oleracea Bo9g009240 N 0.910
Bo9g009260 Brassica oleracea Bo9g009260 N 0.911
Bra037509 Brassica rapa Bra037509 N 0.889
Bra015156 Brassica rapa Bra015156 N 0.711
Bra020715 Brassica rapa Bra020715 N 0.916
Bra026077 Brassica rapa Bra026077 N 0.712
Bra036185 Brassica rapa Bra036185 N 0.905
PK09018.1 Cannabis sativa PK09018.1 N 0.762
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.930
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.703
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.930
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.824
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.705
Ca_09786 Cicer arietinum Ca_09786 N 0.783
Cla001429 Citrullus lanatus Cla001429 N 0.770
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.703
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.762
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.759
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.768
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.786
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.708
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.714
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.789
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.781
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.786
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.810
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.715
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.802
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.730
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.754
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.759
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.757
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.734
MDP0000804652 Malus domestica MDP0000804652 N 0.784
MDP0000205236 Malus domestica MDP0000205236 N 0.700
MDP0000152670 Malus domestica MDP0000152670 N 0.786
MDP0000284679 Malus domestica MDP0000284679 N 0.700
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.708
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.730
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.777
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.746
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.781
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.708
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.713
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.805
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.730
Pm015021 Prunus mume Pm015021 N 0.797
Pm012019 Prunus mume Pm012019 N 0.729
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.708
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.799
27613.m000642 Ricinus communis 27613.m000642 N 0.745
29949.m000124 Ricinus communis 29949.m000124 N 0.785
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.808
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.732
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.770
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.714
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.707
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.770
TCM_002319 Theobroma cacao TCM_002319 N 0.813
TCM_030733 Theobroma cacao TCM_030733 N 0.732
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.803
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.740