LOC100912262 (Rattus norvegicus)
GTF2I-like

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02946 (GTF2I) IPR004212 ENSRNOG00000050193 T203499_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.809 0.809
GTF2IRD1
M10619_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.971 0.971
GTF2IRD1
M10620_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.971 0.971
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000002006 GTF2I-like 128 202
ENSRNOP00000002006 GTF2I-like 351 425
ENSRNOP00000002006 GTF2I-like 565 639
ENSRNOP00000002006 GTF2I-like 690 764
ENSRNOP00000002006 GTF2I-like 787 861
ENSRNOP00000073591 GTF2I-like 128 202
ENSRNOP00000073591 GTF2I-like 351 425
ENSRNOP00000073591 GTF2I-like 565 639
ENSRNOP00000073591 GTF2I-like 690 764
ENSRNOP00000073591 GTF2I-like 814 888
ENSRNOP00000073591 GTF2I-like 917 991

Links

Other GTF2I-like family TFs
Other Rattus norvegicus TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G49010 Arabidopsis thaliana AT1G49010 D 0.000
Bo00685s060 Brassica oleracea Bo00685s060 I 0.000
Bo6g018000 Brassica oleracea Bo6g018000 I 0.000
Bostr.26675s0270 Boechera stricta Bostr.26675s0270 I 0.000
Bra018772 Brassica rapa Bra018772 I 0.000
Cagra.1613s0002 Capsella grandiflora Cagra.1613s0002 I 0.000
Carubv10009808m.g Capsella rubella Carubv10009808m.g I 0.000
Ca_06612 Cicer arietinum Ca_06612 I 0.000
Ciclev10021342m.g Citrus clementina Ciclev10021342m.g I 0.000
Eucgr.K02659 Eucalyptus grandis Eucgr.K02659 I 0.000
GLYMA05G07980 Glycine max GLYMA05G07980 I 0.000
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.000
Pm030197 Prunus mume Pm030197 I 0.000
POPTR_0012s05720 Populus trichocarpa POPTR_0012s05720 I 0.000
PRUPE_ppa009092mg Prunus persica PRUPE_ppa009092mg I 0.000
SapurV1A.0583s0020 Salix purpurea SapurV1A.0583s0020 I 0.000
scaffold_104540.1 Arabidopsis lyrata scaffold_104540.1 I 0.000
Solyc03g119740.2 Solanum lycopersicum Solyc03g119740.2 I 0.000
TCM_012262 Theobroma cacao TCM_012262 I 0.000
Thhalv10011650m.g Eutrema salsugineum Thhalv10011650m.g I 0.000