CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zgc:113176
(
Danio rerio
)
GTF2I-like,Homeodomain,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
PF00046 (Homeobox)
PF00505 (HMG_box)
IPR004212
IPR001356
IPR000910
ENSDARG00000040487
T203591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000059254
Homeodomain
4
58
REERTHINPEQRETLISFFQEGMKHVGSPLITRAASAMGLDTSVIENWIGNYKRS
ENSDARP00000059254
Sox
75
131
HIRELSPYNLFCRDVFRNKGTMNDIKGRWATLGEDEKQKYIEEAAALRAHGQPLSPE
ENSDARP00000059254
GTF2I-like
215
286
LVGKVQDLFNQKYKEAGGTGRLPYQSLMNQGMTIKVAGLPNSLTLRKPSFYGRNQLEAILKAAEGISFEING
ENSDARP00000127980
Homeodomain
3
57
KRERTHINPEQRETLISFFQEGMKHVGSPLITRAASAMGLDTSVIENWIGNYKRS
ENSDARP00000127980
Sox
74
130
HIRELSPYNLFCRDVFRNKGTMNDIKGRWATLGEDEKQKYIEEAAALRAHGQPLSPE
ENSDARP00000127980
GTF2I-like
214
285
LVGKVQDLFNQKYKEAGGTGRLPYQSLMNQGMTIKVAGLPNSLTLRKPSFYGRNQLEAILKAAEGISFEING
Links
Other
GTF2I-like,Homeodomain,Sox
family TFs
Other
Danio rerio
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action