CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ005190
(
Culex pipiens
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
CpipJ_CPIJ005190
T203690_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dve
M03837_2.00
Drosophila melanogaster
VHTAATTADB
VHTAATTADB
SELEX
Nitta et al.(2015)
dve_1
0.864
0.947
dve
M03838_2.00
Drosophila melanogaster
TAATTWATKC
GMATWAATTA
SELEX
Nitta et al.(2015)
dve_2
0.864
0.947
dve
M03839_2.00
Drosophila melanogaster
YHATTATGYTAATKA
TMATTARCATAATDR
SELEX
Nitta et al.(2015)
dve_3
0.864
0.947
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ005190-RA
Homeodomain
280
347
TRMRTSFDPEMELPKLQRWFQENPHPSRQQIQSYVVQLNSLDSRRGRKPLDVNNVVYWFKNARAAQKR
CpipJ_CPIJ005190-RA
Homeodomain
574
641
KRNRTFIDPVTEVPKLEHWFSMNTHPSHNLILKYTEDLNRMAYRQKFPRLESKNVQFWFKNRRAKCKR
Links
Other
Homeodomain
family TFs
Other
Culex pipiens
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy