CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CpipJ_CPIJ005190
(
Culex pipiens
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
CpipJ_CPIJ005190
T203690_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dve
M03837_2.00
Drosophila melanogaster
VHTAATTADB
VHTAATTADB
SELEX
Nitta et al.(2015)
dve_1
0.864
0.947
dve
M03838_2.00
Drosophila melanogaster
TAATTWATKC
GMATWAATTA
SELEX
Nitta et al.(2015)
dve_2
0.864
0.947
dve
M03839_2.00
Drosophila melanogaster
YHATTATGYTAATKA
TMATTARCATAATDR
SELEX
Nitta et al.(2015)
dve_3
0.864
0.947
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ005190-RA
Homeodomain
280
347
TRMRTSFDPEMELPKLQRWFQENPHPSRQQIQSYVVQLNSLDSRRGRKPLDVNNVVYWFKNARAAQKR
CpipJ_CPIJ005190-RA
Homeodomain
574
641
KRNRTFIDPVTEVPKLEHWFSMNTHPSHNLILKYTEDLNRMAYRQKFPRLESKNVQFWFKNRRAKCKR
Links
Other
Homeodomain
family TFs
Other
Culex pipiens
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP10253
Atta cephalotes
ACEP10253
N
0.000
ANCCAN_03211
Ancylostoma caninum
ANCCAN_03211
N
0.000
Bm7270
Brugia malayi
Bm7270
N
0.000
BTMF_0000251301
Brugia timori
BTMF_0000251301
N
0.000
Cflo_10168--XP_001121257.1_APIME
Camponotus floridanus
Cflo_10168--XP_001121257.1_APIME
N
0.000
DME_0000078101
Dracunculus medinensis
DME_0000078101
N
0.000
EVEC_0000366901
Enterobius vermicularis
EVEC_0000366901
N
0.000
GB42021
Apis mellifera
GB42021
N
0.000
GPUH_0001236501
Gongylonema pulchrum
GPUH_0001236501
N
0.000
HCOI00019900
Haemonchus contortus
HCOI00019900
N
0.000
HPBE_0000914901
Heligmosomoides bakeri
HPBE_0000914901
N
0.000
Hsal_12949--XP_001121257.1_APIME
Harpegnathos saltator
Hsal_12949--XP_001121257.1_APIME
N
0.000
LDEC010382
Leptinotarsa decemlineata
LDEC010382
N
0.000
LOAG_18045
Loa loa
LOAG_18045
N
0.000
nAv.1.0.1.g04153
Acanthocheilonema viteae
nAv.1.0.1.g04153
N
0.000
nDi.2.2.2.g06500
Dirofilaria immitis
nDi.2.2.2.g06500
N
0.000
nLs.2.1.2.g05187
Litomosoides sigmodontis
nLs.2.1.2.g05187
N
0.000
nOo.2.0.1.g02446
Onchocerca ochengi
nOo.2.0.1.g02446
N
0.000
NV11270
Nasonia vitripennis
NV11270
N
0.000
OESDEN_10899
Oesophagostomum dentatum
OESDEN_10899
N
0.000
OESDEN_21729
Oesophagostomum dentatum
OESDEN_21729
N
0.000
OFLC_0001133401
Onchocerca flexuosa
OFLC_0001133401
N
0.000
PEQ_0000179401
Parascaris equorum
PEQ_0000179401
N
0.000
scaffold238-EXSNAP2012.17
Pristionchus exspectatus
scaffold238-EXSNAP2012.17
N
0.000
SINV17602
Solenopsis invicta
SINV17602
N
0.000
TCLT_0000794601
Thelazia callipaeda
TCLT_0000794601
N
0.000
TCNE_0001717001
Toxocara canis
TCNE_0001717001
N
0.000
WBGene00243099
Onchocerca volvulus
WBGene00243099
N
0.000
WUBG_01220
Wuchereria bancrofti
WUBG_01220
N
0.000
YQE_05996
Dendroctonus ponderosae
YQE_05996
N
0.000