BGIOSGA002186 (Oryza indica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 BGIOSGA002186 T204679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.780 0.860
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.780 0.860
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.780 0.860
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT

AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.775 0.860
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.775 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA002186-PA Homeodomain 3 63

Links

Other Homeodomain family TFs
Other Oryza indica TFs

330 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_fgenesh1_pg.C_90194 Phytophthora capsici estExt_fgenesh1_pg.C_90194 N 0.000
fgenesh_scip_prom.28083.3493 Phytophthora lateralis fgenesh_scip_prom.28083.3493 N 0.000
fgenesh_scip_prom.46568.8418 Phytophthora kernoviae fgenesh_scip_prom.46568.8418 N 0.000
HpaG808627 Hyaloperonospora arabidopsidis HpaG808627 N 0.000
Phyra84539 Phytophthora ramorum Phyra84539 N 0.000
Physo142772 Phytophthora sojae Physo142772 N 0.000
PITG_17559 Phytophthora infestans PITG_17559 N 0.000