CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CBG25749
(
Caenorhabditis briggsae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CBG25749
T205600_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07914
M02132_2.00
Fusarium graminearum
NNKACATGTHN
NDACATGTMNN
PBM
Weirauch et al.(2014)
pTH6329
0.657
0.308
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG25749
Homeodomain
5
56
SLVTQNTPFLESHFAKQPRPSKFEIWKLALQTSLPEHKIRSWYANRRRRQKE
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis briggsae
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0001325101
Spirometra erinaceieuropaei
SPER_0001325101
I
0.673
SSLN_0000846501
Schistocephalus solidus
SSLN_0000846501
I
0.673
Z519_11142
Cladophialophora bantiana
Z519_11142
I
0.669
Sjc_0052220
Schistosoma japonicum
Sjc_0052220
I
0.663
A_07284
Schistosoma haematobium
A_07284
I
0.659
SMRZ_0000148301
Schistosoma margrebowiei
SMRZ_0000148301
I
0.659
SCUD_0000714801
Schistosoma curassoni
SCUD_0000714801
I
0.659
FGRRES_07914
Fusarium graminearum
FGRRES_07914
D
0.657
ENSAMXG00000000335
Astyanax mexicanus
ENSAMXG00000000335
I
0.645
irx7
Gasterosteus aculeatus
ENSGACG00000011160
I
0.645
ENSXMAG00000012663
Xiphophorus maculatus
ENSXMAG00000012663
I
0.645
irx7
Takifugu rubripes
ENSTRUG00000007926
I
0.645
ENSPFOG00000006638
Poecilia formosa
ENSPFOG00000006638
I
0.645
Aan_R015659
Calypte anna
Aan_R015659
I
0.639
D915_05481
Fasciola hepatica
D915_05481
I
0.639
Gfo_R005354
Geospiza fortis
Gfo_R005354
I
0.635
Afo_R011092
Aptenodytes forsteri
Afo_R011092
I
0.635
COCVIDRAFT_49416
Bipolaris victoriae
COCVIDRAFT_49416
I
0.632
SNOG_06363
Phaeosphaeria nodorum
SNOG_06363
I
0.632
SETTUDRAFT_162538
Setosphaeria turcica
SETTUDRAFT_162538
I
0.632
SNOG_06363
Stagonospora nodorum
SNOG_06363
I
0.632
AB04741.1
Alternaria brassicicola
AB04741.1
I
0.632
COCCADRAFT_44321
Bipolaris zeicola
COCCADRAFT_44321
I
0.632
estExt_Genewise1.C_110663
Cochliobolus heterostrophus C5
estExt_Genewise1.C_110663
I
0.632
COCSADRAFT_107886
Bipolaris sorokiniana
COCSADRAFT_107886
I
0.632
COCMIDRAFT_53102
Bipolaris oryzae
COCMIDRAFT_53102
I
0.632
PTT_11733
Pyrenophora teres
PTT_11733
I
0.632
COCC4DRAFT_49159
Bipolaris maydis
COCC4DRAFT_49159
I
0.632
L898_g17064
Steinernema monticolum
L898_g17064
I
0.631
L892_g27282
Steinernema scapterisci
L892_g27282
I
0.631
CapteG88319
Capitella teleta
CapteG88319
I
0.625
CapteG49895
Capitella teleta
CapteG49895
I
0.625
CapteG100741
Capitella teleta
CapteG100741
I
0.619
ENSPTRG00000039451
Pan troglodytes
ENSPTRG00000039451
I
0.619
ENSSSCG00000009724
Sus scrofa
ENSSSCG00000009724
I
0.617
DILT_0000254701
Diphyllobothrium latum
DILT_0000254701
I
0.616
FGRRES_17555
Fusarium graminearum
FGRRES_17555
I
0.616
DOTSEDRAFT_78718
Dothistroma septosporum
DOTSEDRAFT_78718
I
0.616
FFUJ_12565
Fusarium fujikuroi
FFUJ_12565
I
0.611
FOXG_13545
Fusarium oxysporum
FOXG_13545
I
0.611
CapteG70907
Capitella teleta
CapteG70907
I
0.610
HmN_000922600
Hymenolepis microstoma
HmN_000922600
I
0.606
HNAJ_0001179801
Hymenolepis nana
HNAJ_0001179801
I
0.606
HmN_000921700
Hymenolepis microstoma
HmN_000921700
I
0.606
TASK_0000658901
Taenia asiatica
TASK_0000658901
I
0.606
TTAC_0000670801
Hydatigera taeniaeformis
TTAC_0000670801
I
0.606
TsM_000760900
Taenia solium
TsM_000760900
I
0.606
CCM_02544
Cordyceps militaris
CCM_02544
I
0.604
ATEG_05203
Aspergillus terreus
CADATEAG00005116
I
0.602
HMEL002096
Heliconius melpomene
HMEL002096
I
0.600
HelroG171177
Helobdella robusta
HelroG171177
I
0.600
PXEA_0002454601
Protopolystoma xenopodis
PXEA_0002454601
I
0.600
IRX3
Dasypus novemcinctus
ENSDNOG00000012985
I
0.600
ENSMEUG00000004557
Macropus eugenii
ENSMEUG00000004557
I
0.600
D915_04768
Fasciola hepatica
D915_04768
I
0.599
ECPE_0000388901
Echinostoma caproni
ECPE_0000388901
I
0.599