CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NKX6-1
(
Choloepus hoffmanni
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCHOG00000005454
T207762_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nkx6-1
M00466_2.00
Mus musculus
NDTDATNRN
NYNATHAHN
PBM
Berger et al.(2008)
Nkx6-1_2825
0.360
1.000
NKX6-1
M09151_2.00
Homo sapiens
RAHWRATKDSNWWWTRATD
HATYAWWWNSHMATYWDTY
Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B
0.360
1.000
Nkx6-1
M09200_2.00
Mus musculus
HNWRATKDNHWWWTRATDR
YHATYAWWWDNHMATYWND
Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A
0.360
1.000
Nkx6-1
M09573_2.00
Mus musculus
NDTAATKR
YMATTAHN
Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975
0.360
1.000
NKX6-1
M10718_2.00
Homo sapiens
HWTTTAATKGRWT
AWYCMATTAAAWD
Transfac
Matys et al.(2006)
V$NKX61_01
0.360
1.000
NKX6-1
M10719_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX61_08
0.360
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000004825
Homeodomain
239
283
KHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVK
Links
Other
Homeodomain
family TFs
Other
Choloepus hoffmanni
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy