CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCJAG00000004920
(
Callithrix jacchus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCJAG00000004920
T207913_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RHOXF2
M05132_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
RHOXF2_FL_HT-SELEX
0.730
0.759
RHOXF2
M05133_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
RHOXF2_FL_Methyl-HT-SELEX
0.730
0.778
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000008980
Homeodomain
132
186
VHPFTPSQRRELEGIFRRTQFPSEFLSRRVLARRMNVTEVVVQIWFENRRARWRR
ENSCJAP00000008997
Homeodomain
132
185
VHPFTPSQRRELEGIFRRTQFPSEFLRRVLARRMNVTEVVVQIWFENRRARWRR
Links
Other
Homeodomain
family TFs
Other
Callithrix jacchus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RHOXF2
Homo sapiens
ENSG00000131721
D
0.730
RHOXF2B
Homo sapiens
ENSG00000203989
I
0.730
ENSCSAG00000018343
Chlorocebus sabaeus
ENSCSAG00000018343
I
0.725
ENSPPYG00000020681
Pongo abelii
ENSPPYG00000020681
I
0.724
ENSPANG00000019560
Papio anubis
ENSPANG00000019560
I
0.719
ENSP00000360441
Macaca fascicularis
ENSP00000360441
I
0.719
ENSGGOG00000016116
Gorilla gorilla
ENSGGOG00000016116
I
0.665
ENSMMUG00000032357
Macaca mulatta
ENSMMUG00000032357
I
0.616