CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSETEG00000019318
(
Echinops telfairi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSETEG00000019318
T209442_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NKX6-2
M05184_2.00
Homo sapiens
DTAATTRN
NYAATTAH
SELEX
Yin et al.(2017)
NKX6-2_eDBD_HT-SELEX
0.724
0.815
NKX6-2
M05186_2.00
Homo sapiens
WTAATKAB
VTMATTAW
SELEX
Yin et al.(2017)
NKX6-2_FL_HT-SELEX
0.724
0.815
NKX6-2
M10711_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX62_Q2
0.724
0.815
NKX6-2
M05185_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
NKX6-2_eDBD_Methyl-HT-SELEX
0.724
0.815
NKX6-2
M05187_2.00
Homo sapiens
WTAATKAB
VTMATTAW
SELEX
Yin et al.(2017)
NKX6-2_FL_Methyl-HT-SELEX
0.724
0.815
Nkx6-1
M00466_2.00
Mus musculus
NDTDATNRN
NYNATHAHN
PBM
Berger et al.(2008)
Nkx6-1_2825
0.716
0.796
NKX6-1
M09151_2.00
Homo sapiens
RAHWRATKDSNWWWTRATD
HATYAWWWNSHMATYWDTY
Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B
0.716
0.796
Nkx6-1
M09200_2.00
Mus musculus
HNWRATKDNHWWWTRATDR
YHATYAWWWDNHMATYWND
Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A
0.716
0.796
Nkx6-1
M09573_2.00
Mus musculus
NDTAATKR
YMATTAHN
Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975
0.716
0.796
NKX6-1
M10718_2.00
Homo sapiens
HWTTTAATKGRWT
AWYCMATTAAAWD
Transfac
Matys et al.(2006)
V$NKX61_01
0.716
0.796
NKX6-1
M10719_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX61_08
0.716
0.796
Nkx6-3
M00522_2.00
Mus musculus
NDYDATNRN
NYNATHRHN
PBM
Berger et al.(2008)
Nkx6-3_3446
0.716
0.778
NKX6-3
M05242_2.00
Homo sapiens
NWTAATGRB
VYCATTAWN
SELEX
Yin et al.(2017)
NKX6-3_eDBD_HT-SELEX
0.716
0.778
NKX6-3
M05243_2.00
Homo sapiens
DWTAATGRB
VYCATTAWH
SELEX
Yin et al.(2017)
NKX6-3_eDBD_Methyl-HT-SELEX
0.716
0.778
CBG20882
M01244_2.00
Caenorhabditis briggsae
NDHDATDRN
NYHATHDHN
PBM
Lambert et al.(2019)
pTH11477
0.709
0.611
HGTX
M03869_2.00
Drosophila melanogaster
DTAATKRN
NYMATTAH
SELEX
Nitta et al.(2015)
HGTX_1
0.704
0.778
HGTX
M03870_2.00
Drosophila melanogaster
DTAATKRN
NYMATTAH
SELEX
Nitta et al.(2015)
HGTX_2
0.704
0.778
HGTX
M06542_2.00
Drosophila melanogaster
DTAATKA
TMATTAH
B1H
Mathelier et al.(2014)
MA0191.1
0.704
0.778
HGTX
M06360_2.00
Drosophila melanogaster
DDTAATKA
TMATTAHH
B1H
Zhu et al.(2011)
Hgtx_Cell_FBgn0040318
0.704
0.778
HGTX
M06361_2.00
Drosophila melanogaster
NWTAATKA
TMATTAWN
B1H
Zhu et al.(2011)
Hgtx_SOLEXA_FBgn0040318
0.704
0.778
Q0N4H9_NEMVE
M02165_2.00
Nematostella vectensis
NNYRWWNNN
NNNWWYRNN
PBM
Weirauch et al.(2014)
pTH6101
0.634
0.500
NEMVEDRAFT_v1g129868
M02146_2.00
Nematostella vectensis
NYRAWNDNN
NNHNWTYRN
PBM
Weirauch et al.(2014)
pTH5749
0.632
0.519
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000015693
Homeodomain
15
68
SRPAFSGRIFAVEKTYEPTMFLAAPERAKLAYSLGLTESQVKVWFQNRRTKWRK
Links
Other
Homeodomain
family TFs
Other
Echinops telfairi
TFs
235 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy