ENSGACG00000000220 (Gasterosteus aculeatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGACG00000000220 T209961_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Dbx1
M00451_2.00
Mus musculus
WTTAATTA

TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.867 0.982
Dbx2
M00499_2.00
Mus musculus
NNDTNNN

NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.830 0.875
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA

TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.818 0.875
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA

TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.818 0.875
Hlx
M00485_2.00
Mus musculus
NNNAWND

HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.733 0.696
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA

THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.732 0.696
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA

THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.732 0.696
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN

NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.732 0.696
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000000284 Homeodomain 36 91
ENSGACP00000000286 Homeodomain 4 59

Links

Other Homeodomain family TFs
Other Gasterosteus aculeatus TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL005974 Aedes aegypti AAEL005974 I 0.818
AAEL012150 Aedes aegypti AAEL012150 I 0.684
Aan_R006646 Calypte anna Aan_R006646 I 0.867
Aan_R009530 Calypte anna Aan_R009530 I 0.599
Aan_R012348 Calypte anna Aan_R012348 I 0.830
AATE018929 Anopheles atroparvus AATE018929 I 0.818
ACEP14997 Atta cephalotes ACEP14997 I 0.733
ACOM031223 Anopheles coluzzii ACOM031223 I 0.818
ACYPI27939 Acyrthosiphon pisum ACYPI27939 I 0.828
ACYPI48371 Acyrthosiphon pisum ACYPI48371 I 0.720
ADIR004110 Anopheles dirus ADIR004110 I 0.734
Afo_R000355 Aptenodytes forsteri Afo_R000355 I 0.830
Afo_R010414 Aptenodytes forsteri Afo_R010414 I 0.867
AFUN003184 Anopheles funestus AFUN003184 I 0.734
AGAP005727 Anopheles gambiae AGAP005727 I 0.818
Alligator_sinensis_CCG013033.1 Alligator sinensis Alligator_sinensis_CCG013033.1 I 0.867
AMEM006151 Anopheles merus AMEM006151 I 0.818
ASIS013776 Anopheles sinensis ASIS013776 I 0.734
BGIBMGA008482 Bombyx mori BGIBMGA008482 I 0.734
BGLB013811 Biomphalaria glabrata BGLB013811 I 0.862
Brh_R002799 Buceros rhinoceros Brh_R002799 I 0.867
Brh_R003637 Buceros rhinoceros Brh_R003637 I 0.830
CapteG173964 Capitella teleta CapteG173964 I 0.733
CapteG220261 Capitella teleta CapteG220261 I 0.867
Cflo_10458--XP_001121170.1_APIME Camponotus floridanus Cflo_10458--XP_001121170.1_APIME I 0.733
CGI_10002480 Crassostrea gigas CGI_10002480 I 0.867
CGI_10013972 Crassostrea gigas CGI_10013972 I 0.733
CLEC011407 Cimex lectularius CLEC011407 I 0.734
Cmyd_10016425 Chelonia mydas Cmyd_10016425 I 0.867
D917_00900 Trichinella nativa D917_00900 I 0.657
DAPPUDRAFT_37379 Daphnia pulex DAPPUDRAFT_37379 I 0.824
DAPPUDRAFT_53297 Daphnia pulex DAPPUDRAFT_53297 I 0.764
EFV57815 Trichinella spiralis EFV57815 I 0.657
ENSACAG00000002581 Anolis carolinensis ENSACAG00000002581 I 0.830
ENSACAG00000015317 Anolis carolinensis ENSACAG00000015317 I 0.608
DBX1 Anolis carolinensis ENSACAG00000015625 I 0.867
ENSAMEG00000010272 Ailuropoda melanoleuca ENSAMEG00000010272 I 0.733
ENSAMEG00000015811 Ailuropoda melanoleuca ENSAMEG00000015811 I 0.830
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I 0.654
ENSAMXG00000012905 Astyanax mexicanus ENSAMXG00000012905 I 0.867
ENSAMXG00000013419 Astyanax mexicanus ENSAMXG00000013419 I 0.733
ENSAMXG00000014548 Astyanax mexicanus ENSAMXG00000014548 I 0.823
ENSAMXG00000016737 Astyanax mexicanus ENSAMXG00000016737 I 0.867
ENSAPLG00000011161 Anas platyrhynchos ENSAPLG00000011161 I 0.830
ENSAPLG00000013752 Anas platyrhynchos ENSAPLG00000013752 I 0.867
DBX1 Bos taurus ENSBTAG00000002733 I 0.867
DBX2 Bos taurus ENSBTAG00000006635 I 0.830
HLX Bos taurus ENSBTAG00000014560 I 0.733
ENSBTAP00000003543-D1 Bos grunniens ENSBTAP00000003543-D1 I 0.867
ENSBTAP00000019352-D1 Bos grunniens ENSBTAP00000019352-D1 I 0.733
ENSCAFG00000009372 Canis familiaris ENSCAFG00000009372 I 0.830
HLX Canis familiaris ENSCAFG00000011340 I 0.733
ENSCING00000012835 Ciona intestinalis ENSCING00000012835 I 0.862
hlx Ciona intestinalis ENSCING00000019191 I 0.750
HLX Callithrix jacchus ENSCJAG00000006110 I 0.733
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.867
DBX2 Callithrix jacchus ENSCJAG00000013213 I 0.830
ENSCPOG00000011069 Cavia porcellus ENSCPOG00000011069 I 0.830
DBX1 Cavia porcellus ENSCPOG00000019811 I 0.863
HLX Cavia porcellus ENSCPOG00000024028 I 0.733
ENSCSAG00000005115 Chlorocebus sabaeus ENSCSAG00000005115 I 0.867
ENSCSAG00000015879 Chlorocebus sabaeus ENSCSAG00000015879 I 0.733
dbx1b Danio rerio ENSDARG00000001859 I 0.867
hlx1 Danio rerio ENSDARG00000009134 I 0.733
nanog Danio rerio ENSDARG00000075113 I 0.609
dbx1a Danio rerio ENSDARG00000086393 I 0.867
CABZ01093502.1 Danio rerio ENSDARG00000105053 I 0.826
HLX Dasypus novemcinctus ENSDNOG00000007014 I 0.733
DBX1 Dasypus novemcinctus ENSDNOG00000015450 I 0.867
DBX2 Dasypus novemcinctus ENSDNOG00000046429 I 0.830
Hlx Dipodomys ordii ENSDORG00000001941 I 0.733
HLX Equus caballus ENSECAG00000003025 I 0.733
DBX2 Equus caballus ENSECAG00000012695 I 0.830
DBX1 Equus caballus ENSECAG00000019994 I 0.867
HLX Erinaceus europaeus ENSEEUG00000004973 I 0.733
ENSEEUG00000006518 Erinaceus europaeus ENSEEUG00000006518 I 0.814
ENSFALG00000001676 Ficedula albicollis ENSFALG00000001676 I 0.867
ENSFALG00000010170 Ficedula albicollis ENSFALG00000010170 I 0.830
HLX Felis catus ENSFCAG00000002974 I 0.686
DBX1 Felis catus ENSFCAG00000028654 I 0.867
DBX1 Homo sapiens ENSG00000109851 I 0.867
HLX Homo sapiens ENSG00000136630 I 0.733
DBX2 Homo sapiens ENSG00000185610 I 0.830
ENSGACG00000004000 Gasterosteus aculeatus ENSGACG00000004000 I 0.823
hlx1 Gasterosteus aculeatus ENSGACG00000010057 I 0.733
DBX1 Gasterosteus aculeatus ENSGACG00000014112 I 0.862
DBX1 Gallus gallus ENSGALG00000003965 I 0.867
DBX2 Gallus gallus ENSGALG00000009604 I 0.830
HLX Gorilla gorilla ENSGGOG00000002735 I 0.733
DBX2 Gorilla gorilla ENSGGOG00000004664 I 0.830
ENSGMOG00000001751 Gadus morhua ENSGMOG00000001751 I 0.733
ENSGMOG00000003244 Gadus morhua ENSGMOG00000003244 I 0.867
ENSGMOG00000009056 Gadus morhua ENSGMOG00000009056 I 0.823
ENSLACG00000003968 Latimeria chalumnae ENSLACG00000003968 I 0.828
ENSLACG00000008955 Latimeria chalumnae ENSLACG00000008955 I 0.733
ENSLACG00000011299 Latimeria chalumnae ENSLACG00000011299 I 0.867
HLX Loxodonta africana ENSLAFG00000001289 I 0.733
DBX2 Loxodonta africana ENSLAFG00000005006 I 0.830
DBX1 Loxodonta africana ENSLAFG00000007378 I 0.867
ENSLOCG00000004886 Lepisosteus oculatus ENSLOCG00000004886 I 0.867
ENSLOCG00000016392 Lepisosteus oculatus ENSLOCG00000016392 I 0.733
ENSLOCG00000016431 Lepisosteus oculatus ENSLOCG00000016431 I 0.825
ENSMEUG00000016510 Macropus eugenii ENSMEUG00000016510 I 0.833
ENSMGAG00000002299 Meleagris gallopavo ENSMGAG00000002299 I 0.867
ENSMGAG00000009614 Meleagris gallopavo ENSMGAG00000009614 I 0.830
ENSMICG00000005919 Microcebus murinus ENSMICG00000005919 I 0.733
ENSMICG00000007764 Microcebus murinus ENSMICG00000007764 I 0.830
ENSMLUG00000007038 Myotis lucifugus ENSMLUG00000007038 I 0.830
HLX Myotis lucifugus ENSMLUG00000015571 I 0.733
ENSMMUG00000022290 Macaca mulatta ENSMMUG00000022290 I 0.830
HLX Monodelphis domestica ENSMODG00000004664 I 0.733
DBX1 Monodelphis domestica ENSMODG00000009081 I 0.867
DBX2 Monodelphis domestica ENSMODG00000018530 I 0.833
ENSMPUG00000000372 Mustela putorius furo ENSMPUG00000000372 I 0.830
ENSMPUG00000003954 Mustela putorius furo ENSMPUG00000003954 I 0.733
ENSMPUG00000013914 Mustela putorius furo ENSMPUG00000013914 I 0.867
Dbx1 Mus musculus ENSMUSG00000030507 D 0.867
Hlx Mus musculus ENSMUSG00000039377 D 0.733
Dbx2 Mus musculus ENSMUSG00000045608 D 0.830
ENSNLEG00000013773 Nomascus leucogenys ENSNLEG00000013773 I 0.733
ENSNLEG00000017924 Nomascus leucogenys ENSNLEG00000017924 I 0.830
ENSOANG00000001435 Ornithorhynchus anatinus ENSOANG00000001435 I 0.717
ENSOARG00000008379 Ovis aries ENSOARG00000008379 I 0.867
ENSOARG00000013206 Ovis aries ENSOARG00000013206 I 0.733
ENSOARG00000019598 Ovis aries ENSOARG00000019598 I 0.830
HLX Oryctolagus cuniculus ENSOCUG00000006015 I 0.733
DBX1 Oryctolagus cuniculus ENSOCUG00000007615 I 0.867
ENSOCUG00000022068 Oryctolagus cuniculus ENSOCUG00000022068 I 0.830
DBX2 Otolemur garnettii ENSOGAG00000008999 I 0.830
HLX Otolemur garnettii ENSOGAG00000012065 I 0.733
DBX1 Otolemur garnettii ENSOGAG00000014591 I 0.867
ENSONIG00000005980 Oreochromis niloticus ENSONIG00000005980 I 0.733
ENSONIG00000007144 Oreochromis niloticus ENSONIG00000007144 I 0.867
ENSONIG00000008764 Oreochromis niloticus ENSONIG00000008764 I 0.823
ENSONIG00000012709 Oreochromis niloticus ENSONIG00000012709 I 0.865
HLX Ochotona princeps ENSOPRG00000011504 I 0.717
dbx1b Oryzias latipes ENSORLG00000000807 I 0.867
ENSORLG00000002970 Oryzias latipes ENSORLG00000002970 I 0.823
hlx1 Oryzias latipes ENSORLG00000012055 I 0.733
DBX1 Oryzias latipes ENSORLG00000014512 I 0.867
ENSP00000331470 Macaca fascicularis ENSP00000331470 I 0.830
ENSP00000331470-D1 Bos grunniens ENSP00000331470-D1 I 0.830
ENSPANG00000005953 Papio anubis ENSPANG00000005953 I 0.830
ENSPANG00000010481 Papio anubis ENSPANG00000010481 I 0.733
DBX2 Procavia capensis ENSPCAG00000006299 I 0.830
HLX Procavia capensis ENSPCAG00000012295 I 0.733
ENSPFOG00000004028 Poecilia formosa ENSPFOG00000004028 I 0.867
ENSPFOG00000008292 Poecilia formosa ENSPFOG00000008292 I 0.823
ENSPFOG00000009708 Poecilia formosa ENSPFOG00000009708 I 0.609
ENSPFOG00000014727 Poecilia formosa ENSPFOG00000014727 I 0.867
ENSPFOG00000018919 Poecilia formosa ENSPFOG00000018919 I 0.733
ENSPMAG00000000895 Petromyzon marinus ENSPMAG00000000895 I 0.614
ENSPMAG00000004878 Petromyzon marinus ENSPMAG00000004878 I 0.867
ENSPMAG00000009840 Petromyzon marinus ENSPMAG00000009840 I 0.734
ENSPPYG00000000202 Pongo abelii ENSPPYG00000000202 I 0.733
ENSPPYG00000004431 Pongo abelii ENSPPYG00000004431 I 0.830
ENSPSIG00000009557 Pelodiscus sinensis ENSPSIG00000009557 I 0.829
ENSPSIG00000012138 Pelodiscus sinensis ENSPSIG00000012138 I 0.867
ENSPSIG00000013519 Pelodiscus sinensis ENSPSIG00000013519 I 0.733
HLX Pan troglodytes ENSPTRG00000002004 I 0.733
DBX2 Pan troglodytes ENSPTRG00000004849 I 0.830
HLX Pteropus vampyrus ENSPVAG00000004552 I 0.733
Hlx Rattus norvegicus ENSRNOG00000002309 I 0.733
Dbx2 Rattus norvegicus ENSRNOG00000006885 I 0.830
Dbx1 Rattus norvegicus ENSRNOG00000014706 I 0.867
ENSSARG00000007797 Sorex araneus ENSSARG00000007797 I 0.830
ENSSHAG00000011774 Sarcophilus harrisii ENSSHAG00000011774 I 0.867
ENSSHAG00000012054 Sarcophilus harrisii ENSSHAG00000012054 I 0.733
ENSSHAG00000012659 Sarcophilus harrisii ENSSHAG00000012659 I 0.833
ENSSSCG00000010830 Sus scrofa ENSSSCG00000010830 I 0.733
DBX1 Sus scrofa ENSSSCG00000013350 I 0.867
ENSSTOG00000000232 Ictidomys tridecemlineatus ENSSTOG00000000232 I 0.830
ENSSTOG00000006326 Ictidomys tridecemlineatus ENSSTOG00000006326 I 0.733
ENSSTOG00000015557 Ictidomys tridecemlineatus ENSSTOG00000015557 I 0.867
DBX2 Tupaia belangeri ENSTBEG00000012639 I 0.830
HLX Tupaia belangeri ENSTBEG00000014384 I 0.733
DBX2 Taeniopygia guttata ENSTGUG00000006020 I 0.830
DBX1 Taeniopygia guttata ENSTGUG00000015791 I 0.867
DBX1 Tetraodon nigroviridis ENSTNIG00000004855 I 0.865
dbx1b Tetraodon nigroviridis ENSTNIG00000009613 I 0.867
ENSTNIG00000015979 Tetraodon nigroviridis ENSTNIG00000015979 I 0.823
hlx1 Tetraodon nigroviridis ENSTNIG00000016400 I 0.733
hlx1 Takifugu rubripes ENSTRUG00000006753 I 0.733
dbx1b Takifugu rubripes ENSTRUG00000015886 I 0.867
ENSTRUG00000016696 Takifugu rubripes ENSTRUG00000016696 I 0.823
ENSTSYG00000001451 Tarsius syrichta ENSTSYG00000001451 I 0.830
DBX2 Tursiops truncatus ENSTTRG00000003582 I 0.830
ENSVPAG00000000460 Vicugna pacos ENSVPAG00000000460 I 0.830
ENSXMAG00000004689 Xiphophorus maculatus ENSXMAG00000004689 I 0.823
ENSXMAG00000006476 Xiphophorus maculatus ENSXMAG00000006476 I 0.867
ENSXMAG00000010186 Xiphophorus maculatus ENSXMAG00000010186 I 0.867
ENSXMAG00000017389 Xiphophorus maculatus ENSXMAG00000017389 I 0.733
H2.0 Drosophila melanogaster FBgn0001170 D 0.732
GA11095 Drosophila pseudoobscura FBgn0071150 I 0.732
GA11582 Drosophila pseudoobscura FBgn0071633 I 0.818
GF14286 Drosophila ananassae FBgn0091313 I 0.732
GF20095 Drosophila ananassae FBgn0097102 I 0.818
GG10151 Drosophila erecta FBgn0102462 I 0.732
GG14836 Drosophila erecta FBgn0107091 I 0.818
GH10711 Drosophila grimshawi FBgn0118192 I 0.732
GH16166 Drosophila grimshawi FBgn0123637 I 0.818
GI11292 Drosophila mojavensis FBgn0134053 I 0.732
GI13319 Drosophila mojavensis FBgn0136076 I 0.818
GL19089 Drosophila persimilis FBgn0156689 I 0.732
GL25317 Drosophila persimilis FBgn0162901 I 0.818
GM14459 Drosophila sechellia FBgn0169382 I 0.818
GM17974 Drosophila sechellia FBgn0172881 I 0.732
GD22610 Drosophila simulans FBgn0194011 I 0.732
GJ12089 Drosophila virilis FBgn0199341 I 0.818
GJ12503 Drosophila virilis FBgn0199743 I 0.732
GK12528 Drosophila willistoni FBgn0214538 I 0.818
GK15402 Drosophila willistoni FBgn0217407 I 0.732
GE18959 Drosophila yakuba FBgn0236329 I 0.732
GE21201 Drosophila yakuba FBgn0238476 I 0.818
Dbx Drosophila melanogaster FBgn0261723 D 0.818
fgenesh2_pg.scaffold_222000058 Branchiostoma floridae fgenesh2_pg.scaffold_222000058 I 0.867
GB42897 Apis mellifera GB42897 I 0.733
GB49362 Apis mellifera GB49362 I 0.828
Gfo_R004056 Geospiza fortis Gfo_R004056 I 0.830
gw.473.22.1 Branchiostoma floridae gw.473.22.1 I 0.787
gw.83.80.1 Branchiostoma floridae gw.83.80.1 I 0.755
HelroG148518 Helobdella robusta HelroG148518 I 0.765
HelroG74087 Helobdella robusta HelroG74087 I 0.714
HHAL002166-PA Halyomorpha halys HHAL002166-PA I 0.734
Hsal_11910--XP_001121170.1_APIME Harpegnathos saltator Hsal_11910--XP_001121170.1_APIME I 0.733
ISCW020093 Ixodes scapularis ISCW020093 I 0.828
KGM_12383 Danaus plexippus KGM_12383 I 0.830
KGM_21891 Danaus plexippus KGM_21891 I 0.734
L798_13412 Zootermopsis nevadensis L798_13412 I 0.734
LCUP007749 Lucilia cuprina LCUP007749 I 0.732
LDEC019190 Leptinotarsa decemlineata LDEC019190 I 0.639
LLOJ006552 Lutzomyia longipalpis LLOJ006552 I 0.818
LotgiG64310 Lottia gigantea LotgiG64310 I 0.867
LotgiG80492 Lottia gigantea LotgiG80492 I 0.765
MDOA007091 Musca domestica MDOA007091 I 0.732
MDOA015219 Musca domestica MDOA015219 I 0.818
Myotis_brandtii_DBX2_10029487 Myotis brandtii Myotis_brandtii_DBX2_10029487 I 0.830
NEMVEDRAFT_v1g100892 Nematostella vectensis NEMVEDRAFT_v1g100892 I 0.766
NEMVEDRAFT_v1g80365 Nematostella vectensis NEMVEDRAFT_v1g80365 I 0.766
nRc.2.0.1.g17174 Romanomermis culicivorax nRc.2.0.1.g17174 I 0.845
NV18099 Nasonia vitripennis NV18099 I 0.828
Ocbimv22005553m.g Octopus bimaculoides Ocbimv22005553m.g I 0.867
Ogr19305 Ophisaurus gracilis Ogr19305 I 0.733
PHUM365830 Pediculus humanus PHUM365830 I 0.830
PHUM604510 Pediculus humanus PHUM604510 I 0.734
Pvit_06412 Pogona vitticeps Pvit_06412 I 0.867
Pvit_11516 Pogona vitticeps Pvit_11516 I 0.828
Pvit_13000 Pogona vitticeps Pvit_13000 I 0.733
RPRC002486 Rhodnius prolixus RPRC002486 I 0.418
RPRC010617 Rhodnius prolixus RPRC010617 I 0.734
Sakowv30040055m.g Saccoglossus kowalevskii Sakowv30040055m.g I 0.733
Sakowv30044972m.g Saccoglossus kowalevskii Sakowv30044972m.g I 0.862
SINV11867 Solenopsis invicta SINV11867 I 0.733
SMAR002236 Strigamia maritima SMAR002236 I 0.734
SMU15029512 Schmidtea mediterranea SMU15029512 I 0.709
SMU15032021 Schmidtea mediterranea SMU15032021 I 0.709
SPU_014802 Strongylocentrotus purpuratus SPU_014802 I 0.733
Tal_R005491 Tyto alba Tal_R005491 I 0.830
Tal_R010631 Tyto alba Tal_R010631 I 0.867
TC008368 Tribolium castaneum TC008368 I 0.734
TC015146 Tribolium castaneum TC015146 I 0.830
tetur05g09190 Tetranychus urticae tetur05g09190 I 0.816
tetur22g00030 Tetranychus urticae tetur22g00030 I 0.613
TriadG18102 Trichoplax adhaerens TriadG18102 I 0.856
dbx1 Xenopus tropicalis XB-GENE-480177 I 0.867
dbx2 Xenopus tropicalis XB-GENE-481734 I 0.828
hlx Xenopus tropicalis XB-GENE-483226 I 0.733
dbx2.L Xenopus laevis XB-GENE-6486281 I 0.840
dbx1.S Xenopus laevis XB-GENE-865351 I 0.867
YQE_05944 Dendroctonus ponderosae YQE_05944 I 0.830