CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000022617
(
Poecilia formosa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSPFOG00000022617
T214566_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Cdx1
M00427_2.00
Mus musculus
NWWATDRNN
NNYHATWWN
PBM
Berger et al.(2008)
Cdx1_2245
0.640
0.474
CDX1
M03115_2.00
Homo sapiens
NTTTATKRB
VYMATAAAN
SELEX
Jolma et al.(2013)
CDX1_1
0.640
0.474
CDX1
M05018_2.00
Homo sapiens
VKTTTATKRCN
NGYMATAAAMB
SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX
0.640
0.474
CDX1
M09140_2.00
Homo sapiens
HCWTAAAD
HTTTAWGD
Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C
0.640
0.474
Cdx1
M09186_2.00
Mus musculus
HCWTAAAD
HTTTAWGD
Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C
0.640
0.474
CDX1
M10670_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX1_Q4
0.640
0.474
CDX1
M10671_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX1_Q5
0.640
0.474
CDX1
M10761_2.00
Gallus gallus
BDBWAAK
MTTWVHV
Transfac
Matys et al.(2006)
V$CDXA_01
0.640
0.474
CDX1
M10762_2.00
Gallus gallus
WWWWMYR
YRKWAWW
Transfac
Matys et al.(2006)
V$CDXA_02
0.640
0.474
CDX1
M05019_2.00
Homo sapiens
NGTCGTAAAWB
VWTTTACGACN
SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX
0.640
0.474
Cdx2
M00447_2.00
Mus musculus
NWWAYDRNN
NNYHRTWWN
PBM
Berger et al.(2008)
Cdx2_4272
0.640
0.456
Q70LF3_ARTSF
M02211_2.00
Artemia franciscana
BTAATTAB
VTAATTAV
PBM
Weirauch et al.(2014)
pTH5553
0.640
0.456
CDX2
M03196_2.00
Homo sapiens
KTTTATKRB
VYMATAAAM
SELEX
Jolma et al.(2013)
CDX2_1
0.640
0.456
CDX4
M05129_2.00
Homo sapiens
VKTTTATKRCH
DGYMATAAAMB
SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX
0.640
0.456
CDX2
M05248_2.00
Homo sapiens
NDTWAYRRYN
NRYYRTWAHN
SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1
0.640
0.456
CDX2
M05249_2.00
Homo sapiens
NDWWATKRB
VYMATWWHN
SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2
0.640
0.456
CDX2
M08131_2.00
Homo sapiens
YTTTATKRCHB
VDGYMATAAAR
ChIP-seq
Mathelier et al.(2014)
MA0465.1
0.640
0.456
CDX2
M09152_2.00
Homo sapiens
DTTBATKGCHNB
VNDGCMATVAAH
Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A
0.640
0.456
Cdx2
M09193_2.00
Mus musculus
BTTTATKRCYBY
RVRGYMATAAAV
Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A
0.640
0.456
Cdx4
M09197_2.00
Mus musculus
WGATTTATDRBH
DVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A
0.640
0.456
Cdx2
M09572_2.00
Mus musculus
NTTTTATKRC
GYMATAAAAN
Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586
0.640
0.456
CDX2
M10723_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5_01
0.640
0.456
CDX2
M10724_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5_02
0.640
0.456
CDX2
M10725_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5
0.640
0.456
CDX2
M10726_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q6
0.640
0.456
CDX2
M05250_2.00
Homo sapiens
NRTCGTAWHBNN
NNVDWTACGAYN
SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX
0.640
0.456
CDX4
M05130_2.00
Homo sapiens
BGTCGTAAAHN
NDTTTACGACV
SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1
0.640
0.456
CDX4
M05131_2.00
Homo sapiens
VKTTTATKGCN
NGCMATAAAMB
SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2
0.640
0.456
cad
M03780_2.00
Drosophila melanogaster
NKTTTATKRCHB
VDGYMATAAAMN
SELEX
Nitta et al.(2015)
cad_1
0.632
0.456
cad
M03781_2.00
Drosophila melanogaster
NDTTTATKRCHN
NDGYMATAAAHN
SELEX
Nitta et al.(2015)
cad_2
0.632
0.456
cad
M03782_2.00
Drosophila melanogaster
NDTTTATKRCNB
VNGYMATAAAHN
SELEX
Nitta et al.(2015)
cad_3
0.632
0.456
cad
M03783_2.00
Drosophila melanogaster
NNTTTAYGRYNN
NNRYCRTAAANN
SELEX
Nitta et al.(2015)
cad_4
0.632
0.456
cad
M06223_2.00
Drosophila melanogaster
HTTWATTR
YAATWAAD
B1H
Zhu et al.(2011)
Cad_Cell_FBgn0000251
0.632
0.456
cad
M06224_2.00
Drosophila melanogaster
RBYVDAAMV
BKTTHBRVY
B1H
Zhu et al.(2011)
cad_FlyReg_FBgn0000251
0.632
0.456
cad
M06225_2.00
Drosophila melanogaster
NTTWATKR
YMATWAAN
B1H
Zhu et al.(2011)
Cad_SOLEXA_FBgn0000251
0.632
0.456
cad
M08420_2.00
Drosophila melanogaster
DTTTTATKRYY
RRYMATAAAAH
ChIP-chip
Mathelier et al.(2014)
MA0216.2
0.632
0.456
cad
M09580_2.00
Drosophila melanogaster
DTTTAYGRYN
NRYCRTAAAH
Misc
Heinz et al.(2010)
Drosophila-Embryos_modEncode
0.632
0.456
cad
M09674_2.00
Drosophila melanogaster
HTTTATKRBY
RVYMATAAAD
Misc
Kulakovskiy et al.(2009)
cad
0.632
0.456
cad
M10783_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$CAD_Q6
0.632
0.456
VSX1
M00268_2.00
Homo sapiens
NNWRAYNNN
NNNRTYWNN
PBM
Barrera et al.(2016)
VSX1_R166Q
0.614
0.596
ISX
M00319_2.00
Homo sapiens
DTAATTRK
MYAATTAH
PBM
Barrera et al.(2016)
ISX_REF
0.614
0.614
ISX
M03218_2.00
Homo sapiens
NTAATTARATTAN
NTAATYTAATTAN
SELEX
Jolma et al.(2013)
ISX_1
0.614
0.614
ISX
M03219_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Jolma et al.(2013)
ISX_2
0.614
0.614
ISX
M03220_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
ISX_3
0.614
0.614
ISX
M05304_2.00
Homo sapiens
BTAATTRG
CYAATTAV
SELEX
Yin et al.(2017)
ISX_eDBD_HT-SELEX
0.614
0.614
ISX
M05307_2.00
Homo sapiens
YTAATTRS
SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_HT-SELEX
0.614
0.614
ISX
M05305_2.00
Homo sapiens
NTAATTAG
CTAATTAN
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_1
0.614
0.614
ISX
M05306_2.00
Homo sapiens
HTAAYGHN
NDCRTTAD
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_2
0.614
0.614
ISX
M05308_2.00
Homo sapiens
YTAATTRS
SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_1
0.614
0.614
ISX
M05309_2.00
Homo sapiens
HTAAYGHN
NDCRTTAD
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_2
0.614
0.614
ARX
M00264_2.00
Homo sapiens
NNWRATNNN
NNNATYWNN
PBM
Barrera et al.(2016)
ARX_REF
0.613
0.702
Arx
M00467_2.00
Mus musculus
NTAATTDN
NHAATTAN
PBM
Berger et al.(2008)
Arx_1738
0.613
0.702
ARX
M03076_2.00
Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ARX_1
0.613
0.702
Arx
M03269_2.00
Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Arx_1
0.613
0.702
ARX
M04895_2.00
Homo sapiens
BTAATTRR
YYAATTAV
SELEX
Yin et al.(2017)
ARX_eDBD_HT-SELEX
0.613
0.702
Arx
M10775_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARX_05
0.613
0.702
ARX
M00265_2.00
Homo sapiens
DTAATTRK
MYAATTAH
PBM
Barrera et al.(2016)
ARX_T333N
0.613
0.702
ARX
M04896_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ARX_eDBD_Methyl-HT-SELEX
0.613
0.702
ARX
M00260_2.00
Homo sapiens
NMTAATTANNN
NNNTAATTAKN
PBM
Barrera et al.(2016)
ARX_L343Q
0.613
0.684
ARX
M00261_2.00
Homo sapiens
NNWRAYNNN
NNNRTYWNN
PBM
Barrera et al.(2016)
ARX_P353L
0.613
0.684
ARX
M00262_2.00
Homo sapiens
ATAATTAT
ATAATTAT
PBM
Barrera et al.(2016)
ARX_P353R
0.613
0.684
Nkx2-6
M00496_2.00
Mus musculus
HYAAGTRBNN
NNVYACTTRD
PBM
Berger et al.(2008)
Nkx2-6_3437
0.612
0.456
NKX2-5
M00323_2.00
Homo sapiens
NWYAAGTGSNN
NNSCACTTRWN
PBM
Barrera et al.(2016)
NKX2-5_REF
0.610
0.474
Nkx2-5
M00404_2.00
Mus musculus
NNNRAGDRBN
NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-5_3436
0.610
0.474
NKX2-5
M05346_2.00
Homo sapiens
BHYAAGTGBN
NVCACTTRDV
SELEX
Yin et al.(2017)
NKX2-5_FL_HT-SELEX
0.610
0.474
Nkx2-5
M02686_2.00
Mus musculus
WTAAKWK
MWMTTAW
SELEX
Mathelier et al.(2014)
MA0063.1
0.610
0.474
Nkx2-5
M08136_2.00
Mus musculus
SYTGAGWGSYH
DRSCWCTCARS
ChIP-seq
Mathelier et al.(2014)
MA0503.1
0.610
0.474
NKX2-5
M09163_2.00
Homo sapiens
BKRAGWGV
BCWCTYMV
Misc
Kulakovskiy et al.(2013)
NKX25_HUMAN.H11MO.0.B
0.610
0.474
Nkx2-5
M09177_2.00
Mus musculus
NBYBRAGTGS
SCACTYVRVN
Misc
Kulakovskiy et al.(2013)
NKX25_MOUSE.H11MO.0.A
0.610
0.474
Nkx2-5
M09567_2.00
Mus musculus
HBRAGWGBNN
NNVCWCTYVD
Misc
Heinz et al.(2010)
HL1-Nkx2.5.biotin_GSE21529
0.610
0.474
NKX2-5
M10742_2.00
Homo sapiens
TYAAGTG
CACTTRA
Transfac
Matys et al.(2006)
V$NKX25_01
0.610
0.474
NKX2-5
M10743_2.00
Homo sapiens
CWTAATTV
BAATTAWG
Transfac
Matys et al.(2006)
V$NKX25_02
0.610
0.474
NKX2-5
M10744_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q5
0.610
0.474
NKX2-5
M10745_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q6
0.610
0.474
NKX2-5
M00320_2.00
Homo sapiens
NHBAAKWRN
NYWMTTVDN
PBM
Barrera et al.(2016)
NKX2-5_K183E
0.610
0.474
NKX2-5
M00321_2.00
Homo sapiens
HNAAGTRBNN
NNVYACTTND
PBM
Barrera et al.(2016)
NKX2-5_R161P
0.610
0.474
NKX2-5
M05347_2.00
Homo sapiens
BTYAAGTGGN
NCCACTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_1
0.610
0.474
NKX2-5
M05348_2.00
Homo sapiens
BTYAACGAB
VTCGTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_2
0.610
0.474
Nkx2-3
M00497_2.00
Mus musculus
NNRAGDRNN
NNYHCTYNN
PBM
Berger et al.(2008)
Nkx2-3_3435
0.610
0.456
NKX2-3
M05042_2.00
Homo sapiens
NNBAAGTGBN
NVCACTTVNN
SELEX
Yin et al.(2017)
NKX2-3_eDBD_HT-SELEX
0.610
0.456
NKX2-3
M05045_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_HT-SELEX
0.610
0.456
NKX2-5
M00322_2.00
Homo sapiens
NNNRNNN
NNNYNNN
PBM
Barrera et al.(2016)
NKX2-5_R190C
0.610
0.456
NKX2-5
M00324_2.00
Homo sapiens
NHNNNNN
NNNNNDN
PBM
Barrera et al.(2016)
NKX2-5_T178M
0.610
0.456
NKX2-3
M05043_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_1
0.610
0.456
NKX2-3
M05044_2.00
Homo sapiens
SDYAACGHB
VDCGTTRHS
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_2
0.610
0.456
NKX2-3
M05046_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_1
0.610
0.456
NKX2-3
M05047_2.00
Homo sapiens
SWYAACSHB
VDSGTTRWS
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_2
0.610
0.456
Pph13
M03845_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
Pph13_1
0.608
0.667
Pph13
M06522_2.00
Drosophila melanogaster
NTAATTR
YAATTAN
B1H
Mathelier et al.(2014)
MA0200.1
0.608
0.667
Pph13
M06321_2.00
Drosophila melanogaster
NHTAATTR
YAATTADN
B1H
Zhu et al.(2011)
Pph13_Cell_FBgn0023489
0.608
0.667
Pph13
M06322_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Zhu et al.(2011)
Pph13_SOLEXA_FBgn0023489
0.608
0.667
CG11294
M03855_2.00
Drosophila melanogaster
TAATTVVATTA
TAATBBAATTA
SELEX
Nitta et al.(2015)
CG11294_1
0.608
0.684
CG11294
M03856_2.00
Drosophila melanogaster
TAATTDVATTA
TAATBHAATTA
SELEX
Nitta et al.(2015)
CG11294_2
0.608
0.684
CG11294
M06531_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Mathelier et al.(2014)
MA0172.1
0.608
0.684
CG11294
M06337_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Zhu et al.(2011)
CG11294_Cell_FBgn0030058
0.608
0.684
CG11294
M06338_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
CG11294_SOLEXA_FBgn0030058
0.608
0.684
Uncx
M00443_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Uncx4
0.608
0.614
uncx
M02111_2.00
Tetraodon nigroviridis
NNTAATTRN
NYAATTANN
PBM
Weirauch et al.(2014)
pTH5474
0.608
0.614
UNCX
M03191_2.00
Homo sapiens
NWAATTVVRTHWN
NWDAYBBAATTWN
SELEX
Jolma et al.(2013)
UNCX_1
0.608
0.614
UNCX
M03192_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
UNCX_2
0.608
0.614
Uncx
M03264_2.00
Mus musculus
NTAATTVRATTAN
NTAATYBAATTAN
SELEX
Jolma et al.(2013)
Uncx_1
0.608
0.614
Uncx
M03265_2.00
Mus musculus
NTAATTRR
YYAATTAN
SELEX
Jolma et al.(2013)
Uncx_2
0.608
0.614
UNCX
M05240_2.00
Homo sapiens
NYAATTRV
BYAATTRN
SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX
0.608
0.614
UNCX
M05241_2.00
Homo sapiens
NYRRYKNN
NNMRYYRN
SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX
0.608
0.614
hbn
M03813_2.00
Drosophila melanogaster
HTAATYTAATTAD
HTAATTARATTAD
SELEX
Nitta et al.(2015)
hbn_1
0.608
0.632
hbn
M06506_2.00
Drosophila melanogaster
TTAATTR
YAATTAA
B1H
Mathelier et al.(2014)
MA0226.1
0.608
0.632
hbn
M06291_2.00
Drosophila melanogaster
TWAWTTR
YAAWTWA
B1H
Zhu et al.(2011)
Hbn_Cell_FBgn0008636
0.608
0.632
hbn
M06292_2.00
Drosophila melanogaster
NHTAATTR
YAATTADN
B1H
Zhu et al.(2011)
Hbn_SOLEXA_FBgn0008636
0.608
0.632
Alx3
M00402_2.00
Mus musculus
WAATNDN
NHNATTW
PBM
Berger et al.(2008)
Alx3_3418
0.607
0.667
Alx1
M00471_2.00
Mus musculus
NTAATTRN
NYAATTAN
PBM
Berger et al.(2008)
Cart1_0997
0.607
0.667
Alx1
M00472_2.00
Mus musculus
NTAATDDN
NHHATTAN
PBM
Berger et al.(2008)
Cart1_1275
0.607
0.667
Alx4
M00487_2.00
Mus musculus
NTAATDDN
NHHATTAN
PBM
Berger et al.(2008)
Alx4_1744
0.607
0.667
ALX3
M03172_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_1
0.607
0.667
ALX3
M03173_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_2
0.607
0.667
ALX3
M03174_2.00
Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ALX3_3
0.607
0.667
ALX4
M03079_2.00
Homo sapiens
NTAATYNRRTTAN
NTAAYYNRATTAN
SELEX
Jolma et al.(2013)
ALX4_1
0.607
0.667
ALX1
M03226_2.00
Homo sapiens
NTAATTRVRTTAN
NTAAYBYAATTAN
SELEX
Jolma et al.(2013)
CART1_1
0.607
0.667
Alx1
M03272_2.00
Mus musculus
NNTAATTRRD
HYYAATTANN
SELEX
Jolma et al.(2013)
Alx1_1
0.607
0.667
Alx1
M03273_2.00
Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx1_2
0.607
0.667
Alx4
M03278_2.00
Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx4_1
0.607
0.667
ALX1
M05327_2.00
Homo sapiens
TAATYTAATTA
TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_HT-SELEX
0.607
0.667
ALX3
M05195_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_HT-SELEX
0.607
0.667
ALX3
M05198_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_HT-SELEX
0.607
0.667
ALX4
M04917_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_HT-SELEX
0.607
0.667
ALX1
M09160_2.00
Homo sapiens
VTAATYRVATTA
TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_HUMAN.H11MO.0.B
0.607
0.667
Alx1
M09201_2.00
Mus musculus
VTAATYRVATTA
TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_MOUSE.H11MO.0.B
0.607
0.667
ALX4
M10637_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ALX4_01
0.607
0.667
ALX1
M10741_2.00
Homo sapiens
VVHTAATKNNHATTABYN
NRVTAATDNNMATTADBB
Transfac
Matys et al.(2006)
V$CART1_01
0.607
0.667
ALX1
M05328_2.00
Homo sapiens
TAATYTAATTA
TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_Methyl-HT-SELEX
0.607
0.667
ALX3
M05196_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_1
0.607
0.667
ALX3
M05197_2.00
Homo sapiens
NTAAYBHN
NDVRTTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_2
0.607
0.667
ALX3
M05199_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_1
0.607
0.667
ALX3
M05200_2.00
Homo sapiens
NTAAYGHN
NDCRTTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_2
0.607
0.667
ALX4
M04918_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_1
0.607
0.667
ALX4
M04919_2.00
Homo sapiens
NTWAYGHN
NDCRTWAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_2
0.607
0.667
ENSCING00000016045
M02078_2.00
Ciona intestinalis
NNYTAATTRGN
NCYAATTARNN
PBM
Weirauch et al.(2014)
pTH6551
0.606
0.667
ceh-28
M08210_2.00
Caenorhabditis elegans
AATCGATW
WATCGATT
ChIP-seq
Contrino et al.(2012)
Mw138
0.606
0.474
Isx
M00452_2.00
Mus musculus
NNHDATNN
NNATHDNN
PBM
Berger et al.(2008)
Isx_3445
0.605
0.614
tin
M00559_2.00
Drosophila melanogaster
NWYAAGTGGNN
NNCCACTTRWN
PBM
Busser et al.(2012a)
Tin
0.601
0.404
tin
M03809_2.00
Drosophila melanogaster
BTYAAGTGSN
NSCACTTRAV
SELEX
Nitta et al.(2015)
tin_1
0.601
0.404
tin
M06284_2.00
Drosophila melanogaster
BTYAAGTG
CACTTRAV
B1H
Zhu et al.(2011)
Tin_Cell_FBgn0004110
0.601
0.404
tin
M06285_2.00
Drosophila melanogaster
BCTCAAGTGSVN
NBSCACTTGAGV
B1H
Zhu et al.(2011)
tin_FlyReg_FBgn0004110
0.601
0.404
tin
M06286_2.00
Drosophila melanogaster
BWYAAGTR
YACTTRWV
B1H
Zhu et al.(2011)
Tin_SOLEXA_FBgn0004110
0.601
0.404
tin
M08421_2.00
Drosophila melanogaster
DBTCRAGTGS
SCACTYGAVH
ChIP-chip
Mathelier et al.(2014)
MA0247.2
0.601
0.404
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000030247
Homeodomain
87
143
RQTRVTFTPFQVQELEAVFQQTHYPDVNTRDELAGRLQLTEGRIQIWFQNRRAKWRK
ENSPFOP00000030992
Homeodomain
51
107
RQTRVTFTPFQVQELEAVFQQTHYPDVNTRDELAGRLQLTEGRIQIWFQNRRAKWRK
Links
Other
Homeodomain
family TFs
Other
Poecilia formosa
TFs
1090 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy