PBX2 (Pan troglodytes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPTRG00000018012 T215106_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PBX2
M08134_2.00
Homo sapiens
NWGAKTGACABN

NVTGTCAMTCWN
ChIP-seq
Mathelier et al.(2014)
MA1113.1
0.867 1.000
PBX2
M09165_2.00
Homo sapiens
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C
0.867 1.000
Pbx2
M09199_2.00
Mus musculus
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C
0.867 1.000
pbx4
M02110_2.00
Tetraodon nigroviridis
TTGAYGDV

BHCRTCAA
PBM
Weirauch et al.(2014)
pTH6425
0.867 0.982
Pbx1
M00513_2.00
Mus musculus
NNDKANNNN

NNNNTMHNN
PBM
Berger et al.(2008)
Pbx1_3203
0.867 0.965
PBX1
M05362_2.00
Homo sapiens
NTGATKGAYR

YRTCMATCAN
SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX
0.867 0.965
PBX1
M05364_2.00
Homo sapiens
DTGMTKGRYN

NRYCMAKCAH
SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX
0.867 0.965
PBX1
M02685_2.00
Homo sapiens
WWTGATTGATND

HNATCAATCAWW
SELEX
Mathelier et al.(2014)
MA0070.1
0.867 0.965
PBX1
M09164_2.00
Homo sapiens
DGABTGRCRG

CYGYCAVTCH
Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A
0.867 0.965
PBX1
M09561_2.00
Homo sapiens
TGABTGACAGSC

GSCTGTCAVTCA
Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007
0.867 0.965
PBX1
M10748_2.00
Homo sapiens
WTKATTRDT

AHYAATMAW
Transfac
Matys et al.(2006)
V$PBX1_01
0.867 0.965
PBX1
M10749_2.00
Homo sapiens
DNHTTGATTGATKDB

VHMATCAATCAADNH
Transfac
Matys et al.(2006)
V$PBX1_02
0.867 0.965
PBX1
M10750_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_03
0.867 0.965
PBX1
M10751_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_05
0.867 0.965
PBX1
M10752_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_10
0.867 0.965
PBX1
M10753_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_Q3
0.867 0.965
PBX1
M05363_2.00
Homo sapiens
DTGAKKGAYG

CRTCMMTCAH
SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX
0.867 0.965
PBX1
M05365_2.00
Homo sapiens
MRTCAATCMH

DKGATTGAYK
SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX
0.867 0.965
Pbx3
M09205_2.00
Mus musculus
BBBTGATTGRYNDN

NHNRYCAATCAVVV
Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A
0.865 0.965
exd
M06487_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Mathelier et al.(2014)
MA0222.1
0.822 0.947
exd
M06243_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611
0.822 0.947
exd
M06244_2.00
Drosophila melanogaster
NWRNWYNAAA

TTTNRWNYWN
B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611
0.822 0.947
exd
M06245_2.00
Drosophila melanogaster
NDTGAYRW

WYRTCAHN
B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611
0.822 0.947
exd
M06246_2.00
Drosophila melanogaster
NNDTGAYR

YRTCAHNN
B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611
0.822 0.947
PBX4
M00277_2.00
Homo sapiens
NNDDWHDNNN

NNNHDWHHNN
PBM
Barrera et al.(2016)
PBX4_REF
0.815 0.912
PBX4
M10649_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX4_01
0.815 0.912
CBG10835
M01243_2.00
Caenorhabditis briggsae
NNTKAYDNN

NNHRTMANN
PBM
Lambert et al.(2019)
pTH11444
0.691 0.579
PBX4
M00276_2.00
Homo sapiens
NYTAATTADNN

NNHTAATTARN
PBM
Barrera et al.(2016)
PBX4_R215Q
0.677 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000030759 Homeodomain 245 304

Links

Other Homeodomain family TFs
Other Pan troglodytes TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_063340 Acremonium chrysogenum ACRE_063340 I 0.000
AOL_s00215g23 Arthrobotrys oligospora AOL_s00215g23 I 0.000
M437DRAFT_69578 Aureobasidium melanogenum M437DRAFT_69578 I 0.000
M438DRAFT_301560 Aureobasidium pullulans M438DRAFT_301560 I 0.000
AUEXF2481DRAFT_200794 Aureobasidium subglaciale AUEXF2481DRAFT_200794 I 0.000
BAUCODRAFT_123202 Baudoinia compniacensis BAUCODRAFT_123202 I 0.000
BBA_05156 Beauveria bassiana BBA_05156 I 0.000
COCC4DRAFT_82054 Bipolaris maydis COCC4DRAFT_82054 I 0.000
COCMIDRAFT_79558 Bipolaris oryzae COCMIDRAFT_79558 I 0.000
COCSADRAFT_84232 Bipolaris sorokiniana COCSADRAFT_84232 I 0.000
COCVIDRAFT_30945 Bipolaris victoriae COCVIDRAFT_30945 I 0.000
COCCADRAFT_96484 Bipolaris zeicola COCCADRAFT_96484 I 0.000
Bcin01g01680 Botrytis cinerea Bcin01g01680 I 0.000
CHGG_04631 Chaetomium globosum CHGG_04631 I 0.000
CPUR_01500 Claviceps purpurea CPUR_01500 I 0.000
estExt_Genewise1Plus.C_160056 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_160056 I 0.000
CFIO01_00459 Colletotrichum fioriniae CFIO01_00459 I 0.000
CGGC5_12311 Colletotrichum gloeosporioides CGGC5_12311 I 0.000
GLRG_08331 Colletotrichum graminicola GLRG_08331 I 0.000
CH063_09856 Colletotrichum higginsianum CH063_09856 I 0.000
Cob_10480 Colletotrichum orbiculare Cob_10480 I 0.000
CSUB01_02028 Colletotrichum sublineola CSUB01_02028 I 0.000
estExt_fgenesh1_pg.C_30644 Cryphonectria parasitica estExt_fgenesh1_pg.C_30644 I 0.000
H072_3680 Dactylellina haptotyla H072_3680 I 0.000
DOTSEDRAFT_73058 Dothistroma septosporum DOTSEDRAFT_73058 I 0.000
DRE_03937 Drechslerella stenobrocha DRE_03937 I 0.000
UCREL1_3643 Eutypa lata UCREL1_3643 I 0.000
A1O9_06885 Exophiala aquamarina A1O9_06885 I 0.000
FFUJ_05056 Fusarium fujikuroi FFUJ_05056 I 0.000
FGRRES_17645 Fusarium graminearum FGRRES_17645 I 0.000
FOXG_08626 Fusarium oxysporum FOXG_08626 I 0.000
FPSE_04959 Fusarium pseudograminearum FPSE_04959 I 0.000
NechaG32419 Fusarium solani NechaG32419 I 0.000
FVEG_06046 Fusarium verticillioides FVEG_06046 I 0.000
GGTG_02776 Gaeumannomyces graminis GGTG_02776 I 0.000
CMQ_3812 Grosmannia clavigera CMQ_3812 I 0.000
LEMA_P007120.1 Leptosphaeria maculans LEMA_P007120.1 I 0.000
MPH_13649 Macrophomina phaseolina MPH_13649 I 0.000
MGG_01734 Magnaporthe oryzae MGG_01734 I 0.000
MAPG_01726 Magnaporthe poae MAPG_01726 I 0.000
MBM_07850 Marssonina brunnea MBM_07850 I 0.000
MBR_00455 Metarhizium brunneum MBR_00455 I 0.000
MGU_01088 Metarhizium guizhouense MGU_01088 I 0.000
MAJ_01818 Metarhizium majus MAJ_01818 I 0.000
MYCTH_2298863 Myceliophthora thermophila MYCTH_2298863 I 0.000
estExt_fgenesh1_pm.C_chr_60224 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_60224 I 0.000
e_gw1.18.1708.1 Nectria haematococca e_gw1.18.1708.1 I 0.000
UCRNP2_7317 Neofusicoccum parvum UCRNP2_7317 I 0.000
clr-1 Neurospora crassa NCU07705 D 0.000
estExt_Genewise1.C_31390 Neurospora discreta estExt_Genewise1.C_31390 I 0.000
NEUTE1DRAFT_78712 Neurospora tetrasperma NEUTE1DRAFT_78712 I 0.000
OIDMADRAFT_109343 Oidiodendron maius OIDMADRAFT_109343 I 0.000
F503_05241 Ophiostoma piceae uamh F503_05241 I 0.000
PFICI_04537 Pestalotiopsis fici PFICI_04537 I 0.000
PODANS_6_2840 Podospora anserina PODANS_6_2840 I 0.000
V499_08273 Pseudogymnoascus pannorum V499_08273 I 0.000
PTT_14843 Pyrenophora teres PTT_14843 I 0.000
SAPIO_CDS7108 Scedosporium apiospermum SAPIO_CDS7108 I 0.000
SBOR_2384 Sclerotinia borealis SBOR_2384 I 0.000
SS1G_13144 Sclerotinia sclerotiorum SS1G_13144 I 0.000
SETTUDRAFT_20488 Setosphaeria turcica SETTUDRAFT_20488 I 0.000
SMAC_00847 Sordaria macrospora SMAC_00847 I 0.000
SEPMUDRAFT_163837 Sphaerulina musiva SEPMUDRAFT_163837 I 0.000
SPBR_01382 Sporothrix brasiliensis SPBR_01382 I 0.000
HMPREF1624_03268 Sporothrix schenckii HMPREF1624_03268 I 0.000
S40288_06279 Stachybotrys chartarum S40288_06279 I 0.000
S40285_00264 Stachybotrys chlorohalonata S40285_00264 I 0.000
SNOG_03108 Stagonospora nodorum SNOG_03108 I 0.000
THITE_2115249 Thielavia terrestris THITE_2115249 I 0.000
VHEMI03626 Torrubiella hemipterigena VHEMI03626 I 0.000
PV09_03439 Verruconis gallopava PV09_03439 I 0.000
VDBG_00821 Verticillium albo atrum VDBG_00821 I 0.000
VDBG_00821 Verticillium alfalfae VDBG_00821 I 0.000
Mycgr3G100535 Zymoseptoria tritici Mycgr3G100535 I 0.000