CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTGUG00000002359
(
Taeniopygia guttata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSTGUG00000002359
T216229_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MEIS3
M03093_2.00
Homo sapiens
DTGACANN
NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.853
1.000
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.853
1.000
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.853
1.000
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.853
1.000
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN
NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.759
0.824
KNAT7
M01064_2.00
Arabidopsis thaliana
TGACRKST
ASMYGTCA
PBM
Sullivan et al.(2014)
pTH9798
0.659
0.529
KNAT4
M01238_2.00
Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN
PBM
Lambert et al.(2019)
pTH9968
0.655
0.588
KNAT3
M02051_2.00
Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN
PBM
Weirauch et al.(2014)
pTH7600
0.655
0.588
HOS66
M02156_2.00
Oryza sativa
NNNNDHNN
NNDHNNNN
PBM
Weirauch et al.(2014)
pTH8332
0.620
0.529
Meis1
M00407_2.00
Mus musculus
NTGACADNN
NNHTGTCAN
PBM
Berger et al.(2008)
Meis1_2335
0.483
1.000
Meis2
M00437_2.00
Mus musculus
NTGACANNN
NNNTGTCAN
PBM
Berger et al.(2008)
Mrg1_2246
0.483
1.000
Meis3
M00488_2.00
Mus musculus
NTGACANNN
NNNTGTCAN
PBM
Berger et al.(2008)
Mrg2_2302
0.483
1.000
MEIS1
M03165_2.00
Homo sapiens
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
MEIS1_1
0.483
1.000
MEIS2
M03147_2.00
Homo sapiens
WTGACAGSTGTCAM
KTGACASCTGTCAW
SELEX
Jolma et al.(2013)
MEIS2_1
0.483
1.000
MEIS2
M03148_2.00
Homo sapiens
DTGACAGS
SCTGTCAH
SELEX
Jolma et al.(2013)
MEIS2_2
0.483
1.000
Meis2
M03261_2.00
Mus musculus
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
Meis2_1
0.483
1.000
Meis2
M03262_2.00
Mus musculus
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis2_2
0.483
1.000
Meis3
M03279_2.00
Mus musculus
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
Meis3_1
0.483
1.000
Meis3
M03280_2.00
Mus musculus
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis3_2
0.483
1.000
MEIS2
M02740_2.00
Homo sapiens
TGACASSTGTC
GACASSTGTCA
SELEX
Jolma et al.(2010)
MEIS2_dimer
0.483
1.000
MEIS2
M02741_2.00
Homo sapiens
GGACAKNT
ANMTGTCC
SELEX
Jolma et al.(2010)
MEIS2_monomer
0.483
1.000
MEIS2
M05138_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_eDBD_HT-SELEX
0.483
1.000
MEIS2
M05140_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_HT-SELEX
0.483
1.000
MEIS1
M09148_2.00
Homo sapiens
NTGATTDATDDB
VHHATHAATCAN
Misc
Kulakovskiy et al.(2013)
MEIS1_HUMAN.H11MO.0.A
0.483
1.000
MEIS2
M09143_2.00
Homo sapiens
HTGACAGBTKTBM
KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_HUMAN.H11MO.0.B
0.483
1.000
Meis1
M09178_2.00
Mus musculus
NTGATTDATDDB
VHHATHAATCAN
Misc
Kulakovskiy et al.(2013)
MEIS1_MOUSE.H11MO.0.A
0.483
1.000
Meis2
M09189_2.00
Mus musculus
HTGACAGBTKTBM
KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_MOUSE.H11MO.0.B
0.483
1.000
Meis1
M09568_2.00
Mus musculus
VBTGWCASNN
NNSTGWCAVB
Misc
Heinz et al.(2010)
MastCells-Meis1_GSE48085
0.483
1.000
MEIS1
M10709_2.00
Homo sapiens
NHNTGACAGNDN
NHNCTGTCANDN
Transfac
Matys et al.(2006)
V$MEIS1_01
0.483
1.000
MEIS1
M10710_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEIS1_06
0.483
1.000
MEIS2
M05139_2.00
Homo sapiens
YGACASSYGHCR
YGDCRSSTGTCR
SELEX
Yin et al.(2017)
MEIS2_eDBD_Methyl-HT-SELEX
0.483
1.000
MEIS2
M05141_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_Methyl-HT-SELEX
0.483
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000002425
Homeodomain
1
34
HPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI
Links
Other
Homeodomain
family TFs
Other
Taeniopygia guttata
TFs
1344 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy