F775_28060 (Aegilops tauschii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 F775_28060 T217393_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KNAT7
M01064_2.00
Arabidopsis thaliana
TGACRKST

ASMYGTCA
PBM
Sullivan et al.(2014)
pTH9798
0.820 0.851
KNAT3
M02051_2.00
Arabidopsis thaliana
NNNGACVBNN

NNVBGTCNNN
PBM
Weirauch et al.(2014)
pTH7600
0.818 0.957
KNAT4
M01238_2.00
Arabidopsis thaliana
NNGACNNNN

NNNNGTCNN
PBM
Lambert et al.(2019)
pTH9968
0.818 0.936
HOS66
M02156_2.00
Oryza sativa
NNNNDHNN

NNDHNNNN
PBM
Weirauch et al.(2014)
pTH8332
0.781 0.851
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.676 0.489
MEIS3
M03093_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.667 0.468
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.667 0.468
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.667 0.468
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR

YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.667 0.468
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT22774 Homeodomain 180 229

Links

Other Homeodomain family TFs
Other Aegilops tauschii TFs

507 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.000
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.000
P93632_MAIZE Zea mays P93632_MAIZE D 0.000
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.000
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.000
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.000
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.000
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.000
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.000
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.000
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.000
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.000
29805.m001494 Ricinus communis 29805.m001494 I 0.000
29169.m000017 Ricinus communis 29169.m000017 I 0.000
28752.m000339 Ricinus communis 28752.m000339 I 0.000
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.000
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.000
mgf005133m Mimulus guttatus mgf005133m I 0.000
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.000
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.000
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.000
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.000
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.000
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.000
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.000
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.000
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.000
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.000
mgf021945m Mimulus guttatus mgf021945m I 0.000
mgf010466m Mimulus guttatus mgf010466m I 0.000
mgf009315m Mimulus guttatus mgf009315m I 0.000
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.000
Cla018124 Citrullus lanatus Cla018124 I 0.000
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.000
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.000
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.000
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.000
TCM_042000 Theobroma cacao TCM_042000 I 0.000
TCM_022077 Theobroma cacao TCM_022077 I 0.000
TCM_000665 Theobroma cacao TCM_000665 I 0.000
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.000
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.000
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.000
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.000
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.000
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.000
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.000
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.000
Pm030172 Prunus mume Pm030172 I 0.000
Pm002492 Prunus mume Pm002492 I 0.000
Pm000974 Prunus mume Pm000974 I 0.000
Cla020549 Citrullus lanatus Cla020549 I 0.000
Cla018549 Citrullus lanatus Cla018549 I 0.000
Cla000716 Citrullus lanatus Cla000716 I 0.000
Ca_14618 Cicer arietinum Ca_14618 I 0.000
Ca_12010 Cicer arietinum Ca_12010 I 0.000
Ca_09295 Cicer arietinum Ca_09295 I 0.000
Ca_02499 Cicer arietinum Ca_02499 I 0.000
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.000
Si036068m.g Setaria italica Si036068m.g I 0.000
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.000
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.000
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.000
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.000
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.000
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.000
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.000
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.000
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.000
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.000
MDP0000200319 Malus domestica MDP0000200319 I 0.000
MDP0000181606 Malus domestica MDP0000181606 I 0.000
MDP0000163645 Malus domestica MDP0000163645 I 0.000
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.000
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.000
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.000
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.000
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.000
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.000
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.000
PK07183.1 Cannabis sativa PK07183.1 I 0.000
PK02403.1 Cannabis sativa PK02403.1 I 0.000
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.000
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.000
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.000
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.000
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.000
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.000
MDP0000137561 Malus domestica MDP0000137561 I 0.000
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.000
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.000
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.000
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.000
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.000
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.000
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.000
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.000
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.000
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.000
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.000
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.000
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.000
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.000
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.000
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.000
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.000
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.000
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.000
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.000
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.000
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.000
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.000
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.000
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.000
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.000
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.000
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.000
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.000
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.000
Si029636m.g Setaria italica Si029636m.g I 0.000
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.000
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.000
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.000
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.000
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.000
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.000
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.000
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.000
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.000
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.000
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.000
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.000
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.000
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.000
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.000
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.000
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.000
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.000
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.000
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.000
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.000
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.000
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.000
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.000
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.000
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.000
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.000
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.000
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.000
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.000
Bo7g118400 Brassica oleracea Bo7g118400 I 0.000
Bo7g064000 Brassica oleracea Bo7g064000 I 0.000
Bo4g070350 Brassica oleracea Bo4g070350 I 0.000
Bo1g004960 Brassica oleracea Bo1g004960 I 0.000
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.000
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.000
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.000
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.000
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.000
TOE3 Arabidopsis thaliana AT5G67180 I 0.000
AP2 Arabidopsis thaliana AT4G36920 I 0.000
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.000
Bra011741 Brassica rapa Bra011741 I 0.000
Bra011939 Brassica rapa Bra011939 I 0.000
Bra017809 Brassica rapa Bra017809 I 0.000
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.000
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.000
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.000
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.000
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.000
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.000
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.000
F775_32962 Aegilops tauschii F775_32962 I 0.000
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.000
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.000
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.000
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.000
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.000
Si025305m.g Setaria italica Si025305m.g I 0.000
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.000
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.000
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.000
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.000
OS07G0235800 Oryza sativa OS07G0235800 I 0.000
OS05G0121600 Oryza sativa OS05G0121600 I 0.000
OS03G0818800 Oryza sativa OS03G0818800 I 0.000
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.000
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.000
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.000
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.000
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.000
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.000
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.000
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.000
Si012635m.g Setaria italica Si012635m.g I 0.000
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.000
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.000
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.000
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.000
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.000
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.000
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.000
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.000
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.000
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.000
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.000
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.000
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.000
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.000
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.000
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.000
OBART07G08110 Oryza barthii OBART07G08110 I 0.000
OB06G29960 Oryza brachyantha OB06G29960 I 0.000
OB03G45870 Oryza brachyantha OB03G45870 I 0.000
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.000
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.000
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.000
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.000
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.000
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.000
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.000
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.000
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.000
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.000
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.000
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.000
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.000
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.000
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.000
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.000
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.000
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.000
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.000
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.000
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.000
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.000
evm.TU.supercontig_1.271 Carica papaya evm.TU.supercontig_1.271 N 0.000