GLYMA06G05430 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA06G05430 T218767_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.855 0.900
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.604 0.520
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G05430.10 Homeodomain 412 464
GLYMA06G05430.2 Homeodomain 455 507
GLYMA06G05430.3 Homeodomain 455 507
GLYMA06G05430.4 Homeodomain 447 499
GLYMA06G05430.5 Homeodomain 445 497
GLYMA06G05430.6 Homeodomain 424 476
GLYMA06G05430.7 Homeodomain 424 476
GLYMA06G05430.8 Homeodomain 422 474
GLYMA06G05430.9 Homeodomain 422 474

Links

Other Homeodomain family TFs
Other Glycine max TFs

954 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALUE_0000098101 Ascaris lumbricoides ALUE_0000098101 I 0.000
ALUE_0001653201 Ascaris lumbricoides ALUE_0001653201 I 0.000
CLEC006621 Cimex lectularius CLEC006621 I 0.000
D915_03045 Fasciola hepatica D915_03045 N 0.000
EmuJ_001189700 Echinococcus multilocularis EmuJ_001189700 N 0.000
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.000
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.000
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.000
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.000
HDID_0000423901 Hymenolepis diminuta HDID_0000423901 N 0.000
HmN_000199100 Hymenolepis microstoma HmN_000199100 N 0.000
MCOS_0000760501 Mesocestoides corti MCOS_0000760501 N 0.000
OFLC_0000380401 Onchocerca flexuosa OFLC_0000380401 I 0.000
PEQ_0000701201 Parascaris equorum PEQ_0000701201 I 0.000
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.000
Sjc_0077510 Schistosoma japonicum Sjc_0077510 I 0.000
SMTD_0001918101 Schistosoma mattheei SMTD_0001918101 I 0.000
SPER_0002864701 Spirometra erinaceieuropaei SPER_0002864701 N 0.000
SROB_0000822501 Schistosoma rodhaini SROB_0000822501 I 0.000
TASK_0000366101 Taenia asiatica TASK_0000366101 N 0.000
TsM_000871200 Taenia solium TsM_000871200 N 0.000
TTAC_0000960501 Hydatigera taeniaeformis TTAC_0000960501 N 0.000