GLYMA13G00540 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA13G00540 T218856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MTR_2g038000
M02141_2.00
Medicago truncatula
NDNYWNNNNN

NNNNNWRNHN
PBM
Weirauch et al.(2014)
pTH6339
0.704 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G00540.1 Homeodomain 478 534
GLYMA13G00540.2 Homeodomain 478 534
GLYMA13G00540.3 Homeodomain 478 534
GLYMA13G00540.4 Homeodomain 478 534

Links

Other Homeodomain family TFs
Other Glycine max TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000005420 Ailuropoda melanoleuca ENSAMEG00000005420 N 0.000
ZNF7 Canis familiaris ENSCAFG00000030492 I 0.000
ZNF7 Cavia porcellus ENSCPOG00000010429 I 0.000
ZNF7 Dasypus novemcinctus ENSDNOG00000043881 I 0.000
Zfp7 Dipodomys ordii ENSDORG00000011889 I 0.000
ZNF7 Felis catus ENSFCAG00000012559 N 0.000
ZNF7 Homo sapiens ENSG00000147789 D 0.000
ZNF7 Gorilla gorilla ENSGGOG00000008185 I 0.000
ZNF7 Loxodonta africana ENSLAFG00000010535 I 0.000
ZNF7 Myotis lucifugus ENSMLUG00000016510 I 0.000
ENSMPUG00000006051 Mustela putorius furo ENSMPUG00000006051 I 0.000
ZNF7 Oryctolagus cuniculus ENSOCUG00000022081 I 0.000
ENSPPYG00000018994 Pongo abelii ENSPPYG00000018994 I 0.000
ZNF7 Pan troglodytes ENSPTRG00000020717 I 0.000
ZNF7 Pteropus vampyrus ENSPVAG00000004291 I 0.000
Znf7 Rattus norvegicus ENSRNOG00000050497 I 0.000
LOC108348145 Rattus norvegicus ENSRNOG00000050695 I 0.000
ZNF7 Sorex araneus ENSSARG00000013435 I 0.000
ZNF7 Sus scrofa ENSSSCG00000005890 N 0.000
ENSSTOG00000021142 Ictidomys tridecemlineatus ENSSTOG00000021142 I 0.000