TF Information

HelroG87335 *(Helobdella robusta)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	HelroG87335	T219521_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
VAX2 M00284_2.00	Homo sapiens	NNTAATND	HNATTANN	PBM Barrera et al.(2016) VAX2_REF	0.755	0.614
Vax1 M00398_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Vax1_3499	0.755	0.614
Vax2 M00464_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Vax2_3500	0.755	0.614
VAX2 M03119_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX2_1	0.755	0.614
VAX2 M05030_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_HT-SELEX	0.755	0.614
Vax1 M10764_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$VAX1_04	0.755	0.614
VAX2 M05031_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_Methyl-HT-SELEX	0.755	0.614
Emx2 M00495_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Emx2_3420	0.751	0.614
EMX2 M03210_2.00	Homo sapiens	NBTAATTANN	NNTAATTAVN	SELEX Jolma et al.(2013) EMX2_1	0.751	0.614
EMX2 M03211_2.00	Homo sapiens	YMATTARBTAATKR	YMATTAVYTAATKR	SELEX Jolma et al.(2013) EMX2_2	0.751	0.614
E5 M03814_2.00	Drosophila melanogaster	STAATKNN	NNMATTAS	SELEX Nitta et al.(2015) E5_1	0.751	0.614
EMX2 M05281_2.00	Homo sapiens	YTAATKAB	VTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_HT-SELEX	0.751	0.614
E5 M06507_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0189.1	0.751	0.614
E5 M06293_2.00	Drosophila melanogaster	NBTAATKA	TMATTAVN	B1H Zhu et al.(2011) E5_Cell_FBgn0008646	0.751	0.614
E5 M06294_2.00	Drosophila melanogaster	NTAATDR	YHATTAN	B1H Zhu et al.(2011) E5_SOLEXA_FBgn0008646	0.751	0.614
EMX2 M05282_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_Methyl-HT-SELEX	0.751	0.614
EMX1 M02088_2.00	Homo sapiens	NNTAATKANN	NNTMATTANN	PBM Weirauch et al.(2014) pTH5677	0.751	0.596
EMX1 M03151_2.00	Homo sapiens	NBTAATTRNN	NNYAATTAVN	SELEX Jolma et al.(2013) EMX1_1	0.751	0.596
EMX1 M03152_2.00	Homo sapiens	YMATTARYTAATKR	YMATTARYTAATKR	SELEX Jolma et al.(2013) EMX1_2	0.751	0.596
EMX1 M05145_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_HT-SELEX	0.751	0.596
EMX1 M05147_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) EMX1_FL_HT-SELEX	0.751	0.596
EMX1 M05146_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_Methyl-HT-SELEX	0.751	0.596
EMX1 M05148_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_FL_Methyl-HT-SELEX	0.751	0.596
VAX2 M00283_2.00	Homo sapiens	NNTAAWNDNN	NNHNWTTANN	PBM Barrera et al.(2016) VAX2_L139M	0.749	0.596
ems M02114_2.00	Drosophila melanogaster	NTAATKRNB	VNYMATTAN	PBM Weirauch et al.(2014) pTH5673	0.746	0.579
ems M03789_2.00	Drosophila melanogaster	BTAATTAN	NTAATTAV	SELEX Nitta et al.(2015) ems_1	0.746	0.579
ems M03790_2.00	Drosophila melanogaster	BTAATTAVBVBTAATKRN	NYMATTAVBVBTAATTAV	SELEX Nitta et al.(2015) ems_2	0.746	0.579
ems M03791_2.00	Drosophila melanogaster	BTAATKRN	NYMATTAV	SELEX Nitta et al.(2015) ems_3	0.746	0.579
ems M03792_2.00	Drosophila melanogaster	STAATKRSSSSTAATKRV	BYMATTASSSSYMATTAS	SELEX Nitta et al.(2015) ems_4	0.746	0.579
ems M06484_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Mathelier et al.(2014) MA0219.1	0.746	0.579
ems M06233_2.00	Drosophila melanogaster	WHTAATKR	YMATTADW	B1H Zhu et al.(2011) Ems_Cell_FBgn0000576	0.746	0.579
ems M06234_2.00	Drosophila melanogaster	TSTMATHM	KDATKASA	B1H Zhu et al.(2011) ems_FlyReg_FBgn0000576	0.746	0.579
ems M06235_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Ems_SOLEXA_FBgn0000576	0.746	0.579
ems M09676_2.00	Drosophila melanogaster	WTWATGA	TCATWAW	Misc Kulakovskiy et al.(2009) ems	0.746	0.579
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.737	0.579
lms M03863_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) CG13424_1	0.719	0.561
lms M03864_2.00	Drosophila melanogaster	HTWATTRDWTDATTRR	YYAATHAWHYAATWAD	SELEX Nitta et al.(2015) lms_1	0.719	0.561
lms M06536_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0175.1	0.719	0.561
lms M06347_2.00	Drosophila melanogaster	NYTAATKR	YMATTARN	B1H Zhu et al.(2011) CG13424_Cell_FBgn0034520	0.719	0.561
lms M06348_2.00	Drosophila melanogaster	NNHTAATDRN	NYHATTADNN	B1H Zhu et al.(2011) CG13424_SOLEXA_2_FBgn0034520	0.719	0.561
lms M06349_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) CG13424_SOLEXA_FBgn0034520	0.719	0.561
Nkx1-2 M00503_2.00	Mus musculus	NNTAAWNDN	NHNWTTANN	PBM Berger et al.(2008) Nkx1-2_3214	0.710	0.596
Nkx1-1 M00442_2.00	Mus musculus	NNTAATNDNN	NNHNATTANN	PBM Berger et al.(2008) Nkx1-1_3856	0.709	0.579
slou M00557_2.00	Drosophila melanogaster	NNTAATDRN	NYHATTANN	PBM Busser et al.(2012a) Slou	0.709	0.579
slou M03798_2.00	Drosophila melanogaster	VBTAATTRSB	VSYAATTAVB	SELEX Nitta et al.(2015) slou_1	0.709	0.579
slou M06494_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0245.1	0.709	0.579
slou M06262_2.00	Drosophila melanogaster	BYTAATKR	YMATTARV	B1H Zhu et al.(2011) Slou_Cell_FBgn0002941	0.709	0.579
slou M06263_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Slou_SOLEXA_FBgn0002941	0.709	0.579
CG18599 M06539_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0177.1	0.679	0.579
CG18599 M06354_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) CG18599_Cell_FBgn0038592	0.679	0.579
CG18599 M06355_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) CG18599_SOLEXA_FBgn0038592	0.679	0.579
NEMVEDRAFT_v1g205636 M02150_2.00	Nematostella vectensis	NTAATTAN	NTAATTAN	PBM Weirauch et al.(2014) pTH5491	0.673	0.614
NK7.1 M03847_2.00	Drosophila melanogaster	VTTAAAYGDTD	HAHCRTTTAAB	SELEX Nitta et al.(2015) NK7.1_1	0.670	0.561
NK7.1 M03848_2.00	Drosophila melanogaster	NSTTAATTGVY	RBCAATTAASN	SELEX Nitta et al.(2015) NK7.1_2	0.670	0.561
NK7.1 M06524_2.00	Drosophila melanogaster	TTAATDR	YHATTAA	B1H Mathelier et al.(2014) MA0196.1	0.670	0.561
NK7.1 M06323_2.00	Drosophila melanogaster	NTTAATDR	YHATTAAN	B1H Zhu et al.(2011) NK7.1_Cell_FBgn0024321	0.670	0.561
NK7.1 M06324_2.00	Drosophila melanogaster	YTAATDR	YHATTAR	B1H Zhu et al.(2011) NK7.1_SOLEXA_FBgn0024321	0.670	0.561
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.669	0.579
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.669	0.579
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.669	0.579
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.669	0.579
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.669	0.579
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.669	0.579
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.669	0.579
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.669	0.579
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.669	0.579
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.669	0.579
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.669	0.579
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.669	0.579
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.669	0.579
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.669	0.579
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.669	0.579
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.669	0.579
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.669	0.579
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.669	0.579
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.669	0.579
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.669	0.561
CG11085 M03857_2.00	Drosophila melanogaster	BTAAWYGN	NCRWTTAV	SELEX Nitta et al.(2015) CG11085_1	0.669	0.544
CG11085 M03858_2.00	Drosophila melanogaster	NTAAWCGN	NCGWTTAN	SELEX Nitta et al.(2015) CG11085_2	0.669	0.544
CG11085 M06532_2.00	Drosophila melanogaster	TTAATDG	CHATTAA	B1H Mathelier et al.(2014) MA0171.1	0.669	0.544
CG11085 M06339_2.00	Drosophila melanogaster	NTTAATDGV	BCHATTAAN	B1H Zhu et al.(2011) CG11085_Cell_FBgn0030408	0.669	0.544
CG11085 M06340_2.00	Drosophila melanogaster	NHTAAWBRNN	NNYVWTTADN	B1H Zhu et al.(2011) CG11085_SOLEXA_FBgn0030408	0.669	0.544
Hoxd3 M00531_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Hoxd3_1742	0.664	0.596
Hoxa3 M00172_2.00	Mus musculus	NTAATKRNNN	NNNYMATTAN	PBM Badis et al.(2009) Hoxa3_2783	0.664	0.596
Hoxa3 M00532_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa3_2783	0.664	0.596
Hoxd3 M03287_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxd3_1	0.664	0.596
HOXD3 M05101_2.00	Homo sapiens	CTAATTAS	STAATTAG	SELEX Yin et al.(2017) HOXD3_FL_HT-SELEX	0.664	0.596
HOXA3 M10651_2.00	Homo sapiens	SVTWNDDKB	VMHHNWABS	Transfac Matys et al.(2006) V$HOXA3_01	0.664	0.596
HOXD3 M05102_2.00	Homo sapiens	YTAAYGAY	RTCRTTAR	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_1	0.664	0.596
HOXD3 M05103_2.00	Homo sapiens	CTAATKAC	GTMATTAG	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_2	0.664	0.596
Hoxa4 M00383_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Hoxa4_3426	0.664	0.579
Hoxb3 M00504_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxb3_1720	0.664	0.579
HOXB3 M03126_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXB3_1	0.664	0.579
HOXA4 M05381_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXA4_eDBD_HT-SELEX	0.664	0.579
HOXA4 M10755_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA4_Q2	0.664	0.579
HOXA4 M05382_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA4_eDBD_Methyl-HT-SELEX	0.664	0.579
Hoxa5 M00478_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxa5_3415	0.664	0.561
Hoxb5 M00480_2.00	Mus musculus	NWDWTNNNN	NNNNAWHWN	PBM Berger et al.(2008) Hoxb5_3122	0.664	0.561
HOXB5 M03125_2.00	Homo sapiens	NNKAATKRNN	NNYMATTMNN	SELEX Jolma et al.(2013) HOXB5_1	0.664	0.561
HOXA5 M04968_2.00	Homo sapiens	STAATKRS	SYMATTAS	SELEX Yin et al.(2017) HOXA5_eDBD_HT-SELEX	0.664	0.561
HOXA5 M04971_2.00	Homo sapiens	NTMATKRB	VYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_HT-SELEX	0.664	0.561
HOXB5 M05051_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXB5_eDBD_HT-SELEX	0.664	0.561
HOXB5 M05054_2.00	Homo sapiens	STMATKAB	VTMATKAS	SELEX Yin et al.(2017) HOXB5_FL_HT-SELEX	0.664	0.561
HOXD4 M05273_2.00	Homo sapiens	NTMATKRV	BYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_HT-SELEX	0.664	0.561
HOXD4 M05276_2.00	Homo sapiens	NTAATKRB	VYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_HT-SELEX	0.664	0.561
HOXA5 M10652_2.00	Homo sapiens	NGRDBKBDHNBAVTAATKRRGRDVDDDGSR	YSCHHHBHYCYYMATTABTVNDHVMVHYCN	Transfac Matys et al.(2006) V$HOX13_01	0.664	0.561
HOXA5 M08457_2.00	Homo sapiens	CDBWAATK	MATTWVHG	COMPILED Mathelier et al.(2014) MA0158.1	0.664	0.561
HOXA5 M04969_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_1	0.664	0.561
HOXA5 M04970_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_2	0.664	0.561
HOXA5 M04972_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_1	0.664	0.561
HOXA5 M04973_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_2	0.664	0.561
HOXB5 M05052_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_1	0.664	0.561
HOXB5 M05053_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_2	0.664	0.561
HOXB5 M05055_2.00	Homo sapiens	NTMATKAB	VTMATKAN	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_1	0.664	0.561
HOXB5 M05056_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_2	0.664	0.561
HOXD4 M05274_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_1	0.664	0.561
HOXD4 M05275_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_2	0.664	0.561
HOXD4 M05277_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_1	0.664	0.561
HOXD4 M05278_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_2	0.664	0.561
Q0N4M8_NEMVE M02166_2.00	Nematostella vectensis	HTAATKAC	GTMATTAD	PBM Weirauch et al.(2014) pTH6215	0.663	0.632
lin-39 M08211_2.00	Caenorhabditis elegans	GATTGATG	CATCAATC	ChIP-seq Contrino et al.(2012) Mw154	0.660	0.579
lin-39 M09582_2.00	Caenorhabditis elegans	DTGATWRATK	MATYWATCAH	Misc Heinz et al.(2010) cElegans.L3-LIN39_modEncode	0.660	0.579
Gsx2 M00469_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Gsh2_3990	0.660	0.561
GSX1 M03205_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX1_1	0.660	0.561
GSX2 M03227_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX2_1	0.660	0.561
zen M03805_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) zen_1	0.660	0.561
GSX1 M05271_2.00	Homo sapiens	NYMATNRN	NYNATKRN	SELEX Yin et al.(2017) GSX1_eDBD_HT-SELEX	0.660	0.561
GSX2 M05329_2.00	Homo sapiens	HTAATKRS	SYMATTAD	SELEX Yin et al.(2017) GSX2_eDBD_HT-SELEX	0.660	0.561
zen M06500_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0256.1	0.660	0.561
ind M06527_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0228.1	0.660	0.561
ind M06329_2.00	Drosophila melanogaster	YVYTAATKA	TMATTARBR	B1H Zhu et al.(2011) Ind_Cell_FBgn0025776	0.660	0.561
zen M06276_2.00	Drosophila melanogaster	NBYTAATKA	TMATTARBN	B1H Zhu et al.(2011) Zen_Cell_FBgn0004053	0.660	0.561
zen M06277_2.00	Drosophila melanogaster	AANWTWAWTG	CAWTWAWNTT	B1H Zhu et al.(2011) zen_FlyReg_FBgn0004053	0.660	0.561
zen M06278_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Zen_SOLEXA_FBgn0004053	0.660	0.561
GSX1 M05272_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GSX1_eDBD_Methyl-HT-SELEX	0.660	0.561
GSX2 M05330_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GSX2_eDBD_Methyl-HT-SELEX	0.660	0.561
HOXC4 M00330_2.00	Homo sapiens	YTAATTRB	VYAATTAR	PBM Barrera et al.(2016) HOXC4_REF	0.660	0.544
Hoxb4 M00479_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxb4_2627	0.660	0.544
Hoxc4 M00530_2.00	Mus musculus	NWAATNDNN	NNHNATTWN	PBM Berger et al.(2008) Hoxc4_3491	0.660	0.544
Dfd M03784_2.00	Drosophila melanogaster	VNTAAYKRBN	NVYMRTTANB	SELEX Nitta et al.(2015) Dfd_1	0.660	0.544
Dfd M03785_2.00	Drosophila melanogaster	VYTAATKAYN	NRTMATTARB	SELEX Nitta et al.(2015) Dfd_2	0.660	0.544
HOXB4 M05343_2.00	Homo sapiens	YTAATKAY	RTMATTAR	SELEX Yin et al.(2017) HOXB4_FL_HT-SELEX	0.660	0.544
HOXC4 M05385_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_HT-SELEX	0.660	0.544
Dfd M06481_2.00	Drosophila melanogaster	YTAATGA	TCATTAR	B1H Mathelier et al.(2014) MA0186.1	0.660	0.544
Dfd M06226_2.00	Drosophila melanogaster	VYTAATGA	TCATTAAB	B1H Zhu et al.(2011) Dfd_Cell_FBgn0000439	0.660	0.544
Dfd M06227_2.00	Drosophila melanogaster	TTAATKRY	RYMATTAA	B1H Zhu et al.(2011) Dfd_FlyReg_FBgn0000439	0.660	0.544
Dfd M06228_2.00	Drosophila melanogaster	NBTAATKR	YMATTAVN	B1H Zhu et al.(2011) Dfd_SOLEXA_FBgn0000439	0.660	0.544
HOXB4 M09162_2.00	Homo sapiens	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_HUMAN.H11MO.0.B	0.660	0.544
Hoxb4 M09204_2.00	Mus musculus	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_MOUSE.H11MO.0.A	0.660	0.544
Hoxb4 M09576_2.00	Mus musculus	TGATDRATKRSN	NSYMATYHATCA	Misc Heinz et al.(2010) ES-Hoxb4_GSE34014	0.660	0.544
Dfd M09675_2.00	Drosophila melanogaster	TTAATKRB	VYMATTAA	Misc Kulakovskiy et al.(2009) Dfd	0.660	0.544
Dfd M10784_2.00	Drosophila melanogaster	NNNNRKTAATNNNNNN	NNNNNNATTAMYNNNN	Transfac Matys et al.(2006) I$DFD_01	0.660	0.544
HOXC4 M00328_2.00	Homo sapiens	YTAATTAB	VTAATTAR	PBM Barrera et al.(2016) HOXC4_N178S	0.660	0.544
HOXB4 M05344_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_1	0.660	0.544
HOXB4 M05345_2.00	Homo sapiens	HTAAYKAB	VTMRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_2	0.660	0.544
HOXC4 M05386_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_1	0.660	0.544
HOXC4 M05387_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_2	0.660	0.544
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.658	0.544
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.658	0.544
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.658	0.544
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.658	0.544
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.658	0.544
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.658	0.544
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.658	0.544
en M03793_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) en_1	0.655	0.509
en M06485_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0220.1	0.655	0.509
en M06236_2.00	Drosophila melanogaster	NYTAATTR	YAATTARN	B1H Zhu et al.(2011) En_Cell_FBgn0000577	0.655	0.509
en M06237_2.00	Drosophila melanogaster	DBTAATKR	YMATTAVH	B1H Zhu et al.(2011) en_FlyReg_FBgn0000577	0.655	0.509
en M06238_2.00	Drosophila melanogaster	NNNTAATTRN	NYAATTANNN	B1H Zhu et al.(2011) en_SOLEXA_2_FBgn0000577	0.655	0.509
en M06239_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Zhu et al.(2011) En_SOLEXA_FBgn0000577	0.655	0.509
en M09677_2.00	Drosophila melanogaster	HTAATTRN	NYAATTAD	Misc Kulakovskiy et al.(2009) en	0.655	0.509
en M10785_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EN_Q6	0.655	0.509
inv M06491_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Mathelier et al.(2014) MA0229.1	0.655	0.491
inv M06255_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Zhu et al.(2011) Inv_Cell_FBgn0001269	0.655	0.491
inv M06256_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_2_FBgn0001269	0.655	0.491
inv M06257_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_5_FBgn0001269	0.655	0.491
En2 M00484_2.00	Mus musculus	NNYHATHN	NDATDRNN	PBM Berger et al.(2008) En2_0952	0.654	0.509
EN2 M03189_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) EN2_1	0.654	0.509
EN2 M03190_2.00	Homo sapiens	VBTAATTRNN	NNYAATTAVB	SELEX Jolma et al.(2013) EN2_2	0.654	0.509
En2 M03276_2.00	Mus musculus	VBTAATTASN	NSTAATTAVB	SELEX Jolma et al.(2013) En2_1	0.654	0.509
EN2 M05237_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_HT-SELEX	0.654	0.509
EN2 M05238_2.00	Homo sapiens	VHTDAYGHB	VDCRTHADB	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_1	0.654	0.509
EN2 M05239_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_2	0.654	0.509
En1 M00519_2.00	Mus musculus	HNWTNNN	NNNAWND	PBM Berger et al.(2008) En1_3123	0.654	0.491
EN1 M03180_2.00	Homo sapiens	NNTAATTRVB	VBYAATTANN	SELEX Jolma et al.(2013) EN1_1	0.654	0.491
EN1 M03181_2.00	Homo sapiens	TAATTRSNYAATTA	TAATTRNSYAATTA	SELEX Jolma et al.(2013) EN1_2	0.654	0.491
EN1 M03182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) EN1_3	0.654	0.491
EN1 M03183_2.00	Homo sapiens	TDAKKRSNYMATTA	TAATKRNSYMMTHA	SELEX Jolma et al.(2013) EN1_4	0.654	0.491
EN1 M05218_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_HT-SELEX	0.654	0.491
EN1 M05871_2.00	Homo sapiens	VNYAATTA	TAATTRNB	SMiLE-seq Isakova et al.(2017) EN1	0.654	0.491
EN1 M10714_2.00	Homo sapiens	RTDDTBB	VVAHHAY	Transfac Matys et al.(2006) V$EN1_01	0.654	0.491
EN1 M05219_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_1	0.654	0.491
EN1 M05220_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_2	0.654	0.491
Scr M03799_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) Scr_1	0.651	0.561
Scr M06496_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0203.1	0.651	0.561
Scr M06266_2.00	Drosophila melanogaster	HVYTAATKA	TMATTARBD	B1H Zhu et al.(2011) Scr_Cell_FBgn0003339	0.651	0.561
Scr M06267_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Scr_SOLEXA_FBgn0003339	0.651	0.561
Hoxc5 M00422_2.00	Mus musculus	NWRATND	HNATYWN	PBM Berger et al.(2008) Hoxc5_2630	0.651	0.544
Q24780_9CNID M02205_2.00	Eleutheria dichotoma	NNYTAATTAMN	NKTAATTARNN	PBM Weirauch et al.(2014) pTH6308	0.650	0.509
NOTO M03241_2.00	Homo sapiens	NNTAATKWRN	NYWMATTANN	SELEX Jolma et al.(2013) NOTO_1	0.645	0.561
NOTO M05390_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) NOTO_eDBD_HT-SELEX	0.645	0.561
NOTO M05391_2.00	Homo sapiens	BTMATKRV	BYMATKAV	SELEX Yin et al.(2017) NOTO_eDBD_Methyl-HT-SELEX	0.645	0.561
Otp M00417_2.00	Mus musculus	NNHAATND	HNATTDNN	PBM Berger et al.(2008) Otp_3496	0.638	0.579
HOXA2 M02083_2.00	Homo sapiens	NNNDHHNNN	NNNDDHNNN	PBM Weirauch et al.(2014) pTH5887	0.637	0.596
Hoxa2 M00403_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa2_3079	0.637	0.596
HOXA2 M03097_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXA2_1	0.637	0.596
HOXB2 M03213_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) HOXB2_1	0.637	0.596
Hoxa2 M03251_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxa2_1	0.637	0.596
pb M03872_2.00	Drosophila melanogaster	NTRAYKRY	RYMRTYAN	SELEX Nitta et al.(2015) pb_1	0.637	0.596
HOXA2 M04962_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_HT-SELEX	0.637	0.596
HOXA2 M04965_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_HT-SELEX	0.637	0.596
HOXB2 M05292_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB2_eDBD_HT-SELEX	0.637	0.596
pb M06545_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0238.1	0.637	0.596
pb M06366_2.00	Drosophila melanogaster	BYTAATKA	TMATTARV	B1H Zhu et al.(2011) Pb_Cell_FBgn0051481	0.637	0.596
pb M06367_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Pb_SOLEXA_FBgn0051481	0.637	0.596
Hoxa2 M09566_2.00	Mus musculus	DTGATKGATKDB	VHMATCMATCAH	Misc Heinz et al.(2010) mES-Hoxa2_Donaldson_et_al.	0.637	0.596
HOXA2 M04963_2.00	Homo sapiens	NTAATTAN	NTAATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_1	0.637	0.596
HOXA2 M04964_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_2	0.637	0.596
HOXA2 M04966_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_1	0.637	0.596
HOXA2 M04967_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_2	0.637	0.596
HOXB2 M05293_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_1	0.637	0.596
HOXB2 M05294_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_2	0.637	0.596
otp M03834_2.00	Drosophila melanogaster	BTAATTRN	NYAATTAV	SELEX Nitta et al.(2015) otp_1	0.633	0.561
otp M03835_2.00	Drosophila melanogaster	YTAATTRV	BYAATTAR	SELEX Nitta et al.(2015) otp_2	0.633	0.561
otp M06516_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0236.1	0.633	0.561
otp M06309_2.00	Drosophila melanogaster	HYTAATTA	TAATTARD	B1H Zhu et al.(2011) Otp_Cell_FBgn0015524	0.633	0.561
otp M06310_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Otp_SOLEXA_FBgn0015524	0.633	0.561
C15 M06505_2.00	Drosophila melanogaster	TTAAWKR	YMWTTAA	B1H Mathelier et al.(2014) MA0170.1	0.632	0.491
C15 M06289_2.00	Drosophila melanogaster	BTTAAWKR	YMWTTAAV	B1H Zhu et al.(2011) C15_Cell_FBgn0004863	0.632	0.491
C15 M06290_2.00	Drosophila melanogaster	NWTAAWKR	YMWTTAWN	B1H Zhu et al.(2011) C15_SOLEXA_FBgn0004863	0.632	0.491
TLX3 M05233_2.00	Homo sapiens	NAATKGNNNNNNNNNNNNNCAATTN	NAATTGNNNNNNNNNNNNNCMATTN	SELEX Yin et al.(2017) TLX3_eDBD_HT-SELEX	0.632	0.474
TLX3 M05235_2.00	Homo sapiens	NAATTGNNNNNHNNNNCAATTN	NAATTGNNNNDNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_FL_HT-SELEX	0.632	0.474
TLX3 M05234_2.00	Homo sapiens	NAATTGNNNNNNNNNNDCAATTD	HAATTGHNNNNNNNNNNCAATTN	SELEX Yin et al.(2017) TLX3_eDBD_Methyl-HT-SELEX	0.632	0.474
TLX3 M05236_2.00	Homo sapiens	HAATTRNNNNNNNNNYHATTV	BAATDRNNNNNNNNNYAATTD	SELEX Yin et al.(2017) TLX3_FL_Methyl-HT-SELEX	0.632	0.474
TLX2 M02087_2.00	Homo sapiens	NYRDNNNNNN	NNNNNNHYRN	PBM Weirauch et al.(2014) pTH6482	0.632	0.456
Tlx2 M00526_2.00	Mus musculus	WTTAAWTA	TAWTTAAW	PBM Berger et al.(2008) Tlx2_3498	0.632	0.456
TLX2 M05020_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) TLX2_eDBD_HT-SELEX	0.632	0.456
TLX2 M10672_2.00	Homo sapiens	BNGTAAKDNB	VNHMTTACNV	Transfac Matys et al.(2006) V$NCX_01	0.632	0.456
TLX2 M05021_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) TLX2_eDBD_Methyl-HT-SELEX	0.632	0.456
B-H1 M03829_2.00	Drosophila melanogaster	VNTAAWYGNN	NNCRWTTANB	SELEX Nitta et al.(2015) B-H1_1	0.631	0.526
B-H1 M03830_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H1_2	0.631	0.526
B-H2 M03810_2.00	Drosophila melanogaster	VNTAAAYGNH	DNCRTTTANB	SELEX Nitta et al.(2015) B-H2_1	0.631	0.526
B-H2 M03811_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H2_2	0.631	0.526
B-H2 M06503_2.00	Drosophila melanogaster	WTAATTG	CAATTAW	B1H Mathelier et al.(2014) MA0169.1	0.631	0.526
B-H1 M06512_2.00	Drosophila melanogaster	HTAAWYG	CRWTTAD	B1H Mathelier et al.(2014) MA0168.1	0.631	0.526
NEMVEDRAFT_v1g8907 M02154_2.00	Nematostella vectensis	NTAATDRNNN	NNNYHATTAN	PBM Weirauch et al.(2014) pTH6483	0.630	0.544
Evx2 M00393_2.00	Mus musculus	NNTAAYNN	NNRTTANN	PBM Berger et al.(2008) Evx2_2645	0.629	0.544
Evx1 M00395_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Evx1_3952	0.629	0.544
EVX1 M03102_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX1_1	0.629	0.544
EVX2 M03215_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX2_1	0.629	0.544
EVX1 M04985_2.00	Homo sapiens	VTAATKAB	VTMATTAB	SELEX Yin et al.(2017) EVX1_eDBD_HT-SELEX	0.629	0.544
EVX2 M05295_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_HT-SELEX	0.629	0.544
EVX2 M09158_2.00	Homo sapiens	NBTTTATKRCHNN	NNDGYMATAAAVN	Misc Kulakovskiy et al.(2013) EVX2_HUMAN.H11MO.0.A	0.629	0.544
Evx1 M09174_2.00	Mus musculus	WGATTTATDRBHN	NDVYHATAAATCW	Misc Kulakovskiy et al.(2013) EVX1_MOUSE.H11MO.0.C	0.629	0.544
Evx2 M09173_2.00	Mus musculus	BTTTATKRCHBN	NVDGYMATAAAV	Misc Kulakovskiy et al.(2013) EVX2_MOUSE.H11MO.0.A	0.629	0.544
EVX2 M10736_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EVX2_04	0.629	0.544
EVX1 M04986_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_1	0.629	0.544
EVX1 M04987_2.00	Homo sapiens	HTWAYGAB	VTCRTWAD	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_2	0.629	0.544
EVX2 M05296_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_1	0.629	0.544
EVX2 M05297_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_2	0.629	0.544
eve M00556_2.00	Drosophila melanogaster	NNTAATTARN	NYTAATTANN	PBM Busser et al.(2012a) Eve	0.629	0.526
eve M02115_2.00	Drosophila melanogaster	NTAATNDNN	NNHNATTAN	PBM Weirauch et al.(2014) pTH6436	0.629	0.526
eve M03794_2.00	Drosophila melanogaster	VYTAATKASN	NSTMATTARB	SELEX Nitta et al.(2015) eve_1	0.629	0.526
eve M06486_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0221.1	0.629	0.526
eve M06240_2.00	Drosophila melanogaster	DYTAATKA	TMATTARH	B1H Zhu et al.(2011) Eve_Cell_FBgn0000606	0.629	0.526
eve M06241_2.00	Drosophila melanogaster	HKBTAAYNDTKY	RMAHNRTTAVMD	B1H Zhu et al.(2011) eve_FlyReg_FBgn0000606	0.629	0.526
eve M06242_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Eve_SOLEXA_FBgn0000606	0.629	0.526
eve M09678_2.00	Drosophila melanogaster	NKHTAATKD	HMATTADMN	Misc Kulakovskiy et al.(2009) eve	0.629	0.526
eve M10786_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EVE_Q6	0.629	0.526
vab-7 M02186_2.00	Caenorhabditis elegans	KTAATTAK	MTAATTAM	PBM Weirauch et al.(2014) pTH6104	0.629	0.474
HOXC4 M00329_2.00	Homo sapiens	NTAATKRNN	NNYMATTAN	PBM Barrera et al.(2016) HOXC4_R158L	0.628	0.526
Noto M02101_2.00	Mus musculus	NNHHATDDNN	NNHHATDDNN	PBM Weirauch et al.(2014) pTH6268	0.627	0.544
OdsH M03851_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) OdsH_1	0.621	0.456
OdsH M03852_2.00	Drosophila melanogaster	TAATBNVATTA	TAATBNVATTA	SELEX Nitta et al.(2015) OdsH_2	0.621	0.456
OdsH M06528_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0198.1	0.621	0.456
OdsH M06330_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Zhu et al.(2011) Odsh_Cell_FBgn0026058	0.621	0.456
OdsH M06331_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Odsh_SOLEXA_FBgn0026058	0.621	0.456
Barhl2 M00460_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl2_3868	0.621	0.509
BARHL2 M03157_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_1	0.621	0.509
BARHL2 M03158_2.00	Homo sapiens	NNTAAWBGNN	NNCVWTTANN	SELEX Jolma et al.(2013) BARHL2_2	0.621	0.509
BARHL2 M03159_2.00	Homo sapiens	TAAWYGNNNNTAAWYR	YRWTTANNNNCRWTTA	SELEX Jolma et al.(2013) BARHL2_3	0.621	0.509
BARHL2 M03160_2.00	Homo sapiens	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_4	0.621	0.509
BARHL2 M03161_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_5	0.621	0.509
BARHL2 M03162_2.00	Homo sapiens	TAAWYGNYNHTAAWYG	CRWTTADNRNCRWTTA	SELEX Jolma et al.(2013) BARHL2_6	0.621	0.509
BARHL2 M05164_2.00	Homo sapiens	HTAAAYGNY	RNCRTTTAD	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_1	0.621	0.509
BARHL2 M05165_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_2	0.621	0.509
BARHL2 M05167_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_1	0.621	0.509
BARHL2 M05168_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL2_FL_HT-SELEX_2	0.621	0.509
BARHL2 M05166_2.00	Homo sapiens	NTAAWTGNB	VNCAWTTAN	SELEX Yin et al.(2017) BARHL2_eDBD_Methyl-HT-SELEX	0.621	0.509
BARHL2 M05169_2.00	Homo sapiens	NTAAWTGN	NCAWTTAN	SELEX Yin et al.(2017) BARHL2_FL_Methyl-HT-SELEX	0.621	0.509
Barhl1 M00433_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl1_2590	0.620	0.526
Barhl1 M03258_2.00	Mus musculus	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) Barhl1_1	0.620	0.526
Barhl1 M03259_2.00	Mus musculus	NNTAADNRNN	NNYNHTTANN	SELEX Jolma et al.(2013) Barhl1_2	0.620	0.526
Barhl1 M03260_2.00	Mus musculus	TAAWYGNYNNTAAWYG	CRWTTANNRNCRWTTA	SELEX Jolma et al.(2013) Barhl1_3	0.620	0.526
BARHL1 M05091_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_1	0.620	0.526
BARHL1 M05092_2.00	Homo sapiens	NTAADBGN	NCVHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_2	0.620	0.526
BARHL1 M05093_2.00	Homo sapiens	NTAADKGN	NCMHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_Methyl-HT-SELEX	0.620	0.526
ENSTNIG00000006040 M02106_2.00	Tetraodon nigroviridis	NNNBTAAWHRBNN	NNVYDWTTAVNNN	PBM Weirauch et al.(2014) pTH6503	0.620	0.474
ventx1.2.S M10805_2.00	Xenopus laevis	RSRMAAATWBBVS	SBBBWATTTKYSY	Transfac Matys et al.(2006) V$XVENT1_01	0.619	0.526
PHDP M03849_2.00	Drosophila melanogaster	NTAATKNVATTAN	NTAATBNMATTAN	SELEX Nitta et al.(2015) PHDP_1	0.618	0.579
PHDP M06525_2.00	Drosophila melanogaster	HTAATTD	HAATTAD	B1H Mathelier et al.(2014) MA0457.1	0.618	0.579
PHDP M06325_2.00	Drosophila melanogaster	HTAATT	AATTAD	B1H Zhu et al.(2011) PhdP_Cell_FBgn0025334	0.618	0.579
PHDP M06326_2.00	Drosophila melanogaster	YTAATT	AATTAR	B1H Zhu et al.(2011) PhdP_SOLEXA_FBgn0025334	0.618	0.579
al M03776_2.00	Drosophila melanogaster	TAAYBNVRTTA	TAAYBNVRTTA	SELEX Nitta et al.(2015) al_1	0.617	0.526
al M06477_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0208.1	0.617	0.526
al M06212_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) Al_Cell_FBgn0000061	0.617	0.526
al M06213_2.00	Drosophila melanogaster	NNYTAATTR	YAATTARNN	B1H Zhu et al.(2011) Al_SOLEXA_FBgn0000061	0.617	0.526
repo M03826_2.00	Drosophila melanogaster	VTTAATTARB	VYTAATTAAB	SELEX Nitta et al.(2015) repo_1	0.615	0.491
repo M03827_2.00	Drosophila melanogaster	VKYAATTRRN	NYYAATTRMB	SELEX Nitta et al.(2015) repo_2	0.615	0.491
repo M03828_2.00	Drosophila melanogaster	VBYAATTRVNNBYAATTRVB	VBYAATTRVNNBYAATTRVB	SELEX Nitta et al.(2015) repo_3	0.615	0.491
repo M06511_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0240.1	0.615	0.491
repo M06301_2.00	Drosophila melanogaster	DTTAATTA	TAATTAAH	B1H Zhu et al.(2011) Repo_Cell_FBgn0011701	0.615	0.491
repo M06302_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Repo_SOLEXA_FBgn0011701	0.615	0.491
PHOX2B M00281_2.00	Homo sapiens	NNNNNNNNRY	RYNNNNNNNN	PBM Barrera et al.(2016) PHOX2B_R141Q	0.615	0.544
PHOX2B M00282_2.00	Homo sapiens	TAATTRRY	RYYAATTA	PBM Barrera et al.(2016) PHOX2B_REF	0.615	0.526
Phox2a M00400_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2a_3947	0.615	0.526
Phox2b M00401_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2b_3948	0.615	0.526
PHOX2A M03194_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2A_1	0.615	0.526
PHOX2B M03113_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_1	0.615	0.526
PHOX2B M03114_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_2	0.615	0.526
PHOX2A M05244_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_HT-SELEX	0.615	0.526
PHOX2B M05008_2.00	Homo sapiens	BTAATYRV	BYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_HT-SELEX	0.615	0.526
PHOX2B M05010_2.00	Homo sapiens	TAATTWRATTA	TAATYWAATTA	SELEX Yin et al.(2017) PHOX2B_FL_HT-SELEX	0.615	0.526
Phox2a M09564_2.00	Mus musculus	NTAATBNRATTA	TAATYNVATTAN	Misc Heinz et al.(2010) Neuron-Phox2a_GSE31456	0.615	0.526
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.615	0.526
PHOX2B M00280_2.00	Homo sapiens	NNNHATAAWTDNN	NNHAWTTATDNNN	PBM Barrera et al.(2016) PHOX2B_R141G	0.615	0.526
PHOX2A M05245_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_Methyl-HT-SELEX	0.615	0.526
PHOX2B M05009_2.00	Homo sapiens	BTAATYRN	NYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_Methyl-HT-SELEX	0.615	0.526
PHOX2B M05011_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Yin et al.(2017) PHOX2B_FL_Methyl-HT-SELEX	0.615	0.526
DRGX M03199_2.00	Homo sapiens	NTAATTNRATTAN	NTAATYNAATTAN	SELEX Jolma et al.(2013) DRGX_1	0.615	0.509
DRGX M05253_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_HT-SELEX	0.615	0.509
Drgx M10774_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRXL1_01	0.615	0.509
DRGX M05254_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_Methyl-HT-SELEX	0.615	0.509
CG2808 M03875_2.00	Drosophila melanogaster	TAATYNSRTTA	TAAYSNRATTA	SELEX Nitta et al.(2015) CG2808_1	0.615	0.491
VSX1 M00269_2.00	Homo sapiens	NNWAAYNNN	NNNRTTWNN	PBM Barrera et al.(2016) VSX1_REF	0.615	0.474
VSX2 M00287_2.00	Homo sapiens	NYTAATTARN	NYTAATTARN	PBM Barrera et al.(2016) VSX2_REF	0.615	0.474
Vsx1 M00459_2.00	Mus musculus	NNTAATDDN	NHHATTANN	PBM Berger et al.(2008) Vsx1_1728	0.615	0.474
VSX2 M03124_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX2_1	0.615	0.474
Vsx1 M03267_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Vsx1_1	0.615	0.474
VSX2 M05036_2.00	Homo sapiens	CTAATTAN	NTAATTAG	SELEX Yin et al.(2017) VSX2_eDBD_HT-SELEX	0.615	0.474
VSX2 M05039_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_HT-SELEX	0.615	0.474
Vsx2 M09180_2.00	Mus musculus	NNRGCTAATTAR	YTAATTAGCYNN	Misc Kulakovskiy et al.(2013) VSX2_MOUSE.H11MO.0.C	0.615	0.474
VSX2 M10676_2.00	Homo sapiens	HNNGCTAATTANBN	NVNTAATTAGCNND	Transfac Matys et al.(2006) V$CHX10_01	0.615	0.474
VSX1 M00266_2.00	Homo sapiens	NNTAAYNNN	NNNRTTANN	PBM Barrera et al.(2016) VSX1_G160D	0.615	0.474
VSX2 M05037_2.00	Homo sapiens	VYAATTRR	YYAATTRB	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_1	0.615	0.474
VSX2 M05038_2.00	Homo sapiens	NTAAYKHN	NDMRTTAN	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_2	0.615	0.474
VSX2 M05040_2.00	Homo sapiens	NTAAYKVN	NBMRTTAN	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_1	0.615	0.474
VSX2 M05041_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_2	0.615	0.474
VSX2 M00285_2.00	Homo sapiens	NDTWTATTHNNN	NNNDAATAWAHN	PBM Barrera et al.(2016) VSX2_R200P	0.615	0.456
VSX2 M00286_2.00	Homo sapiens	YRWKWNN	NNWMWYR	PBM Barrera et al.(2016) VSX2_R200Q	0.615	0.456
NEMVEDRAFT_v1g81309 M02152_2.00	Nematostella vectensis	NTAATDNNN	NNNHATTAN	PBM Weirauch et al.(2014) pTH5477	0.614	0.526
SHOX M02095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5805	0.611	0.509
Shox2 M00439_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Shox2_2641	0.611	0.509
SHOX M03232_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) SHOX_1	0.611	0.509
SHOX2 M03204_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) SHOX2_1	0.611	0.509
Shox2 M03263_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Shox2_1	0.611	0.509
CG5369 M03876_2.00	Drosophila melanogaster	TAATTHVATTA	TAATBDAATTA	SELEX Nitta et al.(2015) CG5369_1	0.611	0.509
CG5369 M03877_2.00	Drosophila melanogaster	TAATTRNNTAATBN	NVATTANNYAATTA	SELEX Nitta et al.(2015) CG5369_2	0.611	0.509
CG5369 M03878_2.00	Drosophila melanogaster	TAATTVRATWA	TWATYBAATTA	SELEX Nitta et al.(2015) CG5369_3	0.611	0.509
SHOX M05366_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_HT-SELEX	0.611	0.509
Shox2 M10772_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SHOX2_05	0.611	0.509
SHOX M05367_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_1	0.611	0.509
SHOX M05368_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_2	0.611	0.509
SNAPOd2T00006620001 M02231_2.00	Oikopleura dioica	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5666	0.610	0.491
ARX M00261_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) ARX_P353L	0.610	0.526
ARX M00264_2.00	Homo sapiens	NNWRATNNN	NNNATYWNN	PBM Barrera et al.(2016) ARX_REF	0.609	0.509
Arx M00467_2.00	Mus musculus	NTAATTDN	NHAATTAN	PBM Berger et al.(2008) Arx_1738	0.609	0.509
ARX M03076_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ARX_1	0.609	0.509
Arx M03269_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Arx_1	0.609	0.509
ARX M04895_2.00	Homo sapiens	BTAATTRR	YYAATTAV	SELEX Yin et al.(2017) ARX_eDBD_HT-SELEX	0.609	0.509
Arx M10775_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARX_05	0.609	0.509
ARX M00262_2.00	Homo sapiens	ATAATTAT	ATAATTAT	PBM Barrera et al.(2016) ARX_P353R	0.609	0.509
ARX M04896_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ARX_eDBD_Methyl-HT-SELEX	0.609	0.509
Uncx M00443_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Uncx4	0.609	0.491
uncx M02111_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5474	0.609	0.491
UNCX M03191_2.00	Homo sapiens	NWAATTVVRTHWN	NWDAYBBAATTWN	SELEX Jolma et al.(2013) UNCX_1	0.609	0.491
UNCX M03192_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) UNCX_2	0.609	0.491
Uncx M03264_2.00	Mus musculus	NTAATTVRATTAN	NTAATYBAATTAN	SELEX Jolma et al.(2013) Uncx_1	0.609	0.491
Uncx M03265_2.00	Mus musculus	NTAATTRR	YYAATTAN	SELEX Jolma et al.(2013) Uncx_2	0.609	0.491
UNCX M05240_2.00	Homo sapiens	NYAATTRV	BYAATTRN	SELEX Yin et al.(2017) UNCX_eDBD_HT-SELEX	0.609	0.491
ARX M00260_2.00	Homo sapiens	NMTAATTANNN	NNNTAATTAKN	PBM Barrera et al.(2016) ARX_L343Q	0.609	0.491
UNCX M05241_2.00	Homo sapiens	NYRRYKNN	NNMRYYRN	SELEX Yin et al.(2017) UNCX_eDBD_Methyl-HT-SELEX	0.609	0.491
unc-4 M03846_2.00	Drosophila melanogaster	TAATTNAATTA	TAATTNAATTA	SELEX Nitta et al.(2015) unc-4_1	0.609	0.456
unc-4 M06523_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0250.1	0.609	0.456
hbn M03813_2.00	Drosophila melanogaster	HTAATYTAATTAD	HTAATTARATTAD	SELEX Nitta et al.(2015) hbn_1	0.608	0.474
hbn M06506_2.00	Drosophila melanogaster	TTAATTR	YAATTAA	B1H Mathelier et al.(2014) MA0226.1	0.608	0.474
hbn M06291_2.00	Drosophila melanogaster	TWAWTTR	YAAWTWA	B1H Zhu et al.(2011) Hbn_Cell_FBgn0008636	0.608	0.474
hbn M06292_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Hbn_SOLEXA_FBgn0008636	0.608	0.474
Alx3 M00402_2.00	Mus musculus	WAATNDN	NHNATTW	PBM Berger et al.(2008) Alx3_3418	0.607	0.491
ALX3 M03172_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_1	0.607	0.491
ALX3 M03173_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_2	0.607	0.491
ALX3 M03174_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ALX3_3	0.607	0.491
Pph13 M03845_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Pph13_1	0.607	0.491
ALX3 M05195_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_HT-SELEX	0.607	0.491
ALX3 M05198_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_HT-SELEX	0.607	0.491
Pph13 M06522_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Mathelier et al.(2014) MA0200.1	0.607	0.491
Pph13 M06321_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Pph13_Cell_FBgn0023489	0.607	0.491
Pph13 M06322_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Pph13_SOLEXA_FBgn0023489	0.607	0.491
ALX3 M05196_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_1	0.607	0.491
ALX3 M05197_2.00	Homo sapiens	NTAAYBHN	NDVRTTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_2	0.607	0.491
ALX3 M05199_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_1	0.607	0.491
ALX3 M05200_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_2	0.607	0.491
exex M03871_2.00	Drosophila melanogaster	NNNNYAATTNNYDN	NHRNNAATTRNNNN	SELEX Nitta et al.(2015) exex_1	0.606	0.561
exex M06544_2.00	Drosophila melanogaster	BTAATTA	TAATTAV	B1H Mathelier et al.(2014) MA0224.1	0.606	0.561
exex M06364_2.00	Drosophila melanogaster	TAATTAV	BTAATTA	B1H Zhu et al.(2011) Exex_Cell_FBgn0041156	0.606	0.561
exex M06365_2.00	Drosophila melanogaster	TAATBR	YVATTA	B1H Zhu et al.(2011) Exex_SOLEXA_FBgn0041156	0.606	0.561
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.606	0.544
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.606	0.544
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.606	0.544
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.606	0.544
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.606	0.544
Gbx2 M00462_2.00	Mus musculus	NNDAHNN	NNDTHNN	PBM Berger et al.(2008) Gbx2_3110	0.606	0.509
Gbx1 M00525_2.00	Mus musculus	NNTAATNR	YNATTANN	PBM Berger et al.(2008) Gbx1_2883	0.606	0.509
GBX1 M03193_2.00	Homo sapiens	NBTAATTRSB	VSYAATTAVN	SELEX Jolma et al.(2013) GBX1_1	0.606	0.509
GBX2 M03201_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_1	0.606	0.509
GBX2 M03202_2.00	Homo sapiens	TAATTRVBCAATWA	TWATTGVBYAATTA	SELEX Jolma et al.(2013) GBX2_2	0.606	0.509
GBX2 M03203_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_3	0.606	0.509
Gbx1 M03286_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx1_1	0.606	0.509
Gbx2 M03268_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx2_1	0.606	0.509
GBX2 M05265_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_HT-SELEX	0.606	0.509
GBX2 M05268_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) GBX2_FL_HT-SELEX	0.606	0.509
GBX2 M05266_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_1	0.606	0.509
GBX2 M05267_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_2	0.606	0.509
GBX2 M05269_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_1	0.606	0.509
GBX2 M05270_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_2	0.606	0.509
unpg M03836_2.00	Drosophila melanogaster	SSTAATYRVN	NBYRATTASS	SELEX Nitta et al.(2015) unpg_1	0.606	0.491
unpg M06517_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0251.1	0.606	0.491
unpg M06311_2.00	Drosophila melanogaster	NBTAATTR	YAATTAVN	B1H Zhu et al.(2011) Unpg_Cell_FBgn0015561	0.606	0.491
unpg M06312_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Unpg_SOLEXA_FBgn0015561	0.606	0.491
VENTX M02091_2.00	Homo sapiens	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH5490	0.605	0.474
VENTX M00305_2.00	Homo sapiens	DTAATTRR	YYAATTAH	PBM Barrera et al.(2016) VENTX_REF	0.605	0.474
VENTX M03169_2.00	Homo sapiens	YTAATBGNT	ANCVATTAR	SELEX Jolma et al.(2013) VENTX_1	0.605	0.474
VENTX M03170_2.00	Homo sapiens	VSYTAATSGRWAAMCGATTAG	CTAATCGKTTWYCSATTARSB	SELEX Jolma et al.(2013) VENTX_2	0.605	0.474
VENTX M05188_2.00	Homo sapiens	CGHTAATBG	CVATTADCG	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_1	0.605	0.474
VENTX M05189_2.00	Homo sapiens	VNTAATBRNN	NNYVATTANB	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_2	0.605	0.474
VENTX M00303_2.00	Homo sapiens	NVTAATTANNN	NNNTAATTABN	PBM Barrera et al.(2016) VENTX_E101K	0.605	0.474
VENTX M05190_2.00	Homo sapiens	VHTAATKRNN	NNYMATTADB	SELEX Yin et al.(2017) VENTX_FL_Methyl-HT-SELEX	0.605	0.474
VENTX M00304_2.00	Homo sapiens	NATAYATAB	VTATRTATN	PBM Barrera et al.(2016) VENTX_R143C	0.605	0.456
Q70HR3_PLEPI M02210_2.00	Pleurobrachia pileus	NVVTACTWRD	HYWAGTABBN	PBM Weirauch et al.(2014) pTH6529	0.605	0.491
Alx1 M00471_2.00	Mus musculus	NTAATTRN	NYAATTAN	PBM Berger et al.(2008) Cart1_0997	0.603	0.491
Alx1 M00472_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Cart1_1275	0.603	0.491
Alx4 M00487_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Alx4_1744	0.603	0.491
ALX4 M03079_2.00	Homo sapiens	NTAATYNRRTTAN	NTAAYYNRATTAN	SELEX Jolma et al.(2013) ALX4_1	0.603	0.491
ALX1 M03226_2.00	Homo sapiens	NTAATTRVRTTAN	NTAAYBYAATTAN	SELEX Jolma et al.(2013) CART1_1	0.603	0.491
Alx1 M03272_2.00	Mus musculus	NNTAATTRRD	HYYAATTANN	SELEX Jolma et al.(2013) Alx1_1	0.603	0.491
Alx1 M03273_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx1_2	0.603	0.491
Alx4 M03278_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx4_1	0.603	0.491
ALX1 M05327_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_HT-SELEX	0.603	0.491
ALX4 M04917_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_HT-SELEX	0.603	0.491
ALX1 M09160_2.00	Homo sapiens	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_HUMAN.H11MO.0.B	0.603	0.491
Alx1 M09201_2.00	Mus musculus	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_MOUSE.H11MO.0.B	0.603	0.491
ALX4 M10637_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ALX4_01	0.603	0.491
ALX1 M10741_2.00	Homo sapiens	VVHTAATKNNHATTABYN	NRVTAATDNNMATTADBB	Transfac Matys et al.(2006) V$CART1_01	0.603	0.491
ALX1 M05328_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_Methyl-HT-SELEX	0.603	0.491
ALX4 M04918_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_1	0.603	0.491
ALX4 M04919_2.00	Homo sapiens	NTWAYGHN	NDCRTWAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_2	0.603	0.491
CG32532 M03874_2.00	Drosophila melanogaster	NTAAYBNVRTTAN	NTAAYBNVRTTAN	SELEX Nitta et al.(2015) CG32532_1	0.603	0.456
CG32532 M06547_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0179.1	0.603	0.456
CG32532 M06370_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG32532_Cell_FBgn0052532	0.603	0.456
CG32532 M06371_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG32532_SOLEXA_FBgn0052532	0.603	0.456
vsx2 M02079_2.00	Danio rerio	NNYTAATTARN	NYTAATTARNN	PBM Weirauch et al.(2014) pTH6221	0.603	0.456
VSX1 M00267_2.00	Homo sapiens	NNHAAYNNN	NNNRTTDNN	PBM Barrera et al.(2016) VSX1_Q175H	0.603	0.456
ro M06495_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0241.1	0.602	0.526
ro M06264_2.00	Drosophila melanogaster	NYTAATTA	TAATTARN	B1H Zhu et al.(2011) Ro_Cell_FBgn0003267	0.602	0.526
ro M06265_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Ro_SOLEXA_FBgn0003267	0.602	0.526
zfhx4 M02108_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5654	0.601	0.368
zfh-2 M01850_2.00	Caenorhabditis elegans	NYTAATTARNN	NNYTAATTARN	PBM Weirauch et al.(2014) pTH6132	0.601	0.351
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.600	0.439
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.600	0.439
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.600	0.439
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.600	0.421
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.600	0.421
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.600	0.421
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.600	0.421
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.600	0.421
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.600	0.421
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.600	0.421
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.600	0.421
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.600	0.421
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.600	0.421
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.600	0.421
HOXB1 M05057_2.00	Homo sapiens	NTAATTAS	STAATTAN	SELEX Yin et al.(2017) HOXB1_eDBD_HT-SELEX	0.599	0.596
HOXB1 M05058_2.00	Homo sapiens	GTAATBAN	NTVATTAC	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_1	0.599	0.596
HOXB1 M05059_2.00	Homo sapiens	NTRAYGMB	VKCRTYAN	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_2	0.599	0.596
For this family, TFs with SR scores > 0.599* will likely have a similar motif*