CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG160290
(
Lottia gigantea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
LotgiG160290
T220113_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dlx2
M00423_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Dlx2_2273
0.655
0.456
DLX2
M03118_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
DLX2_1
0.655
0.456
Dlx2
M03254_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Dlx2_1
0.655
0.456
DLX2
M05026_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_HT-SELEX
0.655
0.456
DLX2
M05028_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_HT-SELEX
0.655
0.456
DLX2
M10674_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX2_Q6
0.655
0.456
DLX2
M05027_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_Methyl-HT-SELEX
0.655
0.456
DLX2
M05029_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_Methyl-HT-SELEX
0.655
0.456
Lhx1
M00405_2.00
Mus musculus
TRATDRNNN
NNNYHATYA
PBM
Berger et al.(2008)
Lhx1_2240
0.652
0.386
Lhx5
M00445_2.00
Mus musculus
TAATKRNNN
NNNYMATTA
PBM
Berger et al.(2008)
Lhx5_2279
0.652
0.386
LHX1
M05410_2.00
Homo sapiens
NTRATBRN
NYVATYAN
SELEX
Yin et al.(2017)
LHX1_eDBD_HT-SELEX
0.652
0.386
LHX5
M04936_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
LHX5_FL_HT-SELEX
0.652
0.386
LHX1
M05411_2.00
Homo sapiens
NHRAYGHN
NDCRTYDN
SELEX
Yin et al.(2017)
LHX1_eDBD_Methyl-HT-SELEX
0.652
0.386
LHX5
M04937_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_1
0.652
0.386
LHX5
M04938_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_2
0.652
0.386
Dlx1
M00491_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Dlx1_1741
0.645
0.439
DLX1
M03166_2.00
Homo sapiens
NNTAATTDNN
NNHAATTANN
SELEX
Jolma et al.(2013)
DLX1_1
0.645
0.439
DLX6
M03078_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
DLX6_1
0.645
0.439
Dlx1
M03281_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Dlx1_1
0.645
0.439
DLX1
M05176_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX1_eDBD_HT-SELEX
0.645
0.439
DLX1
M05178_2.00
Homo sapiens
NTAATTRB
VYAATTAN
SELEX
Yin et al.(2017)
DLX1_FL_HT-SELEX
0.645
0.439
DLX6
M04905_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX6_eDBD_HT-SELEX
0.645
0.439
DLX1
M05177_2.00
Homo sapiens
NTAATTRB
VYAATTAN
SELEX
Yin et al.(2017)
DLX1_eDBD_Methyl-HT-SELEX
0.645
0.439
DLX1
M05179_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX1_FL_Methyl-HT-SELEX
0.645
0.439
DLX6
M04906_2.00
Homo sapiens
NTAAYKAB
VTMRTTAN
SELEX
Yin et al.(2017)
DLX6_eDBD_Methyl-HT-SELEX_1
0.645
0.439
DLX6
M04907_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX6_eDBD_Methyl-HT-SELEX_2
0.645
0.439
Dlx3
M00387_2.00
Mus musculus
NTAATDRNN
NNYHATTAN
PBM
Berger et al.(2008)
Dlx3_1030
0.644
0.439
DLX3
M03081_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
DLX3_1
0.644
0.439
DLX3
M04922_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX3_eDBD_HT-SELEX
0.644
0.439
DLX3
M04925_2.00
Homo sapiens
NTAATTRB
VYAATTAN
SELEX
Yin et al.(2017)
DLX3_FL_HT-SELEX
0.644
0.439
DLX3
M09129_2.00
Homo sapiens
RVTAATTRVH
DBYAATTABY
Misc
Kulakovskiy et al.(2013)
DLX3_HUMAN.H11MO.0.C
0.644
0.439
Dlx3
M09172_2.00
Mus musculus
RVTAATTRVH
DBYAATTABY
Misc
Kulakovskiy et al.(2013)
DLX3_MOUSE.H11MO.0.C
0.644
0.439
dlx3.L
M10803_2.00
Xenopus laevis
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX3_02
0.644
0.439
DLX3
M10638_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX3_Q3
0.644
0.439
DLX3
M10639_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX3_Q6
0.644
0.439
dlx3.L
M10804_2.00
Xenopus laevis
YAWRTAAAYAWWRY
RYWWTRTTTAYWWR
Transfac
Matys et al.(2006)
V$XFD1_01
0.644
0.439
DLX3
M04923_2.00
Homo sapiens
NTWAYKHB
VDMRTWAN
SELEX
Yin et al.(2017)
DLX3_eDBD_Methyl-HT-SELEX_1
0.644
0.439
DLX3
M04924_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX3_eDBD_Methyl-HT-SELEX_2
0.644
0.439
DLX3
M04926_2.00
Homo sapiens
NTWAYGHB
VDCRTWAN
SELEX
Yin et al.(2017)
DLX3_FL_Methyl-HT-SELEX_1
0.644
0.439
DLX3
M04927_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX3_FL_Methyl-HT-SELEX_2
0.644
0.439
Lim1
M03853_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
Lim1_1
0.641
0.386
Lim1
M06529_2.00
Drosophila melanogaster
TTAATTA
TAATTAA
B1H
Mathelier et al.(2014)
MA0194.1
0.641
0.386
Lim1
M06332_2.00
Drosophila melanogaster
TTAATTA
TAATTAA
B1H
Zhu et al.(2011)
Lim1_Cell_FBgn0026411
0.641
0.386
Lim1
M06333_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
Lim1_SOLEXA_FBgn0026411
0.641
0.386
Dll
M02112_2.00
Drosophila melanogaster
NVTAATTANN
NNTAATTABN
PBM
Weirauch et al.(2014)
pTH5506
0.639
0.421
Dll
M03777_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
Dll_1
0.639
0.421
Dll
M03778_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
Dll_2
0.639
0.421
Dll
M06479_2.00
Drosophila melanogaster
TAATTDB
VHAATTA
B1H
Mathelier et al.(2014)
MA0187.1
0.639
0.421
Dll
M06217_2.00
Drosophila melanogaster
TAATTDB
VHAATTA
B1H
Zhu et al.(2011)
Dll_Cell_FBgn0000157
0.639
0.421
Dll
M06218_2.00
Drosophila melanogaster
TAATKR
YMATTA
B1H
Zhu et al.(2011)
Dll_SOLEXA_FBgn0000157
0.639
0.421
Prrx1
M00431_2.00
Mus musculus
TAATTRNN
NNYAATTA
PBM
Berger et al.(2008)
Prrx1_3442
0.633
0.491
PRRX1
M03120_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
PRRX1_1
0.633
0.491
PRRX1
M03121_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
PRRX1_2
0.633
0.491
PRRX1
M03122_2.00
Homo sapiens
TAATTVRRTTA
TAAYYBAATTA
SELEX
Jolma et al.(2013)
PRRX1_3
0.633
0.491
Prrx1
M10770_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PMX1_01
0.633
0.491
PRRX1
M10675_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PMX1_Q6
0.633
0.491
CG9876
M03865_2.00
Drosophila melanogaster
SVTVATBRSN
NSYVATBABS
SELEX
Nitta et al.(2015)
CG9876_1
0.633
0.474
CG9876
M03866_2.00
Drosophila melanogaster
NTAATTRV
BYAATTAN
SELEX
Nitta et al.(2015)
CG9876_2
0.633
0.474
CG9876
M03867_2.00
Drosophila melanogaster
TAATYTAATTA
TAATTARATTA
SELEX
Nitta et al.(2015)
CG9876_3
0.633
0.474
CG9876
M03868_2.00
Drosophila melanogaster
TAATTRVNTAATTR
YAATTANBYAATTA
SELEX
Nitta et al.(2015)
CG9876_4
0.633
0.474
CG9876
M06537_2.00
Drosophila melanogaster
BTAATTR
YAATTAV
B1H
Mathelier et al.(2014)
MA0184.1
0.633
0.474
CG9876
M06350_2.00
Drosophila melanogaster
DBTAATTR
YAATTAVH
B1H
Zhu et al.(2011)
CG9876_Cell_FBgn0034821
0.633
0.474
CG9876
M06351_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
CG9876_SOLEXA_FBgn0034821
0.633
0.474
Prrx2
M00486_2.00
Mus musculus
WRATNNN
NNNATYW
PBM
Berger et al.(2008)
Prrx2_3072
0.633
0.456
PRRX2
M03200_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
PRRX2_1
0.633
0.456
Prrx2
M03277_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Prrx2_1
0.633
0.456
PRRX2
M05262_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PRRX2_FL_HT-SELEX
0.633
0.456
PRRX2
M05258_2.00
Homo sapiens
NTNAYGHN
NDCRTNAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_1
0.633
0.456
PRRX2
M05259_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_2
0.633
0.456
PRRX2
M09156_2.00
Homo sapiens
HTAATTR
YAATTAD
Misc
Kulakovskiy et al.(2013)
PRRX2_HUMAN.H11MO.0.C
0.633
0.456
Prrx2
M09207_2.00
Mus musculus
HTAATTR
YAATTAD
Misc
Kulakovskiy et al.(2013)
PRRX2_MOUSE.H11MO.0.C
0.633
0.456
PRRX2
M10735_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRRX2_05
0.633
0.456
PRRX2
M10776_2.00
Sus scrofa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRX2_Q2
0.633
0.456
Prrx2
M10767_2.00
Mus musculus
HNVHTAATTRRNHNDW
WHNDNYYAATTADBND
Transfac
Matys et al.(2006)
V$S8_01
0.633
0.456
PRRX2
M05260_2.00
Homo sapiens
NTAAYGHN
NDCRTTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_1
0.633
0.456
PRRX2
M05261_2.00
Homo sapiens
NTAATYRN
NYRATTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_2
0.633
0.456
PRRX2
M05263_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_1
0.633
0.456
PRRX2
M05264_2.00
Homo sapiens
HTAAYGHN
NDCRTTAD
SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_2
0.633
0.456
Dlx5
M00449_2.00
Mus musculus
WRATNDN
NHNATYW
PBM
Berger et al.(2008)
Dlx5_3419
0.629
0.421
DLX5
M03095_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
DLX5_1
0.629
0.421
DLX5
M04953_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_HT-SELEX
0.629
0.421
DLX5
M04956_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_FL_HT-SELEX
0.629
0.421
Dlx5
M09195_2.00
Mus musculus
WAATTRYWKBB
VVMWRYAATTW
Misc
Kulakovskiy et al.(2013)
DLX5_MOUSE.H11MO.0.C
0.629
0.421
DLX5
M10650_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX5_Q3
0.629
0.421
DLX5
M04954_2.00
Homo sapiens
NTAAYDAB
VTHRTTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_1
0.629
0.421
DLX5
M04955_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_2
0.629
0.421
DLX5
M04957_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_1
0.629
0.421
DLX5
M04958_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_2
0.629
0.421
ventx3.2
M02232_2.00
Xenopus tropicalis
ATTAATTA
TAATTAAT
PBM
Weirauch et al.(2014)
pTH6291
0.624
0.474
ESX1
M00292_2.00
Homo sapiens
NNTAATNDN
NHNATTANN
PBM
Barrera et al.(2016)
ESX1_REF
0.620
0.509
ESX1
M03137_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_1
0.620
0.509
ESX1
M03138_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_2
0.620
0.509
ESX1
M05087_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_HT-SELEX
0.620
0.509
ESX1
M05089_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_HT-SELEX
0.620
0.509
ESX1
M05088_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_Methyl-HT-SELEX
0.620
0.509
ESX1
M05090_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_Methyl-HT-SELEX
0.620
0.509
LHX2
M02085_2.00
Homo sapiens
NNNYAAHDDN
NHHDTTRNNN
PBM
Weirauch et al.(2014)
pTH5812
0.618
0.386
Lhx2
M00380_2.00
Mus musculus
NTAATKRN
NYMATTAN
PBM
Berger et al.(2008)
Lhx2_0953
0.618
0.386
Lhx9
M00406_2.00
Mus musculus
NTAATDRN
NYHATTAN
PBM
Berger et al.(2008)
Lhx9_3492
0.618
0.386
LHX2
M03106_2.00
Homo sapiens
NNTAATTAGN
NCTAATTANN
SELEX
Jolma et al.(2013)
LHX2_1
0.618
0.386
LHX2
M03107_2.00
Homo sapiens
YAATTANVCTAATTR
YAATTAGBNTAATTR
SELEX
Jolma et al.(2013)
LHX2_2
0.618
0.386
LHX9
M03163_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
LHX9_1
0.618
0.386
LHX9
M03164_2.00
Homo sapiens
TAATTRGYMATTA
TAATKRCYAATTA
SELEX
Jolma et al.(2013)
LHX9_2
0.618
0.386
LHX9
M05170_2.00
Homo sapiens
YTAATTRG
CYAATTAR
SELEX
Yin et al.(2017)
LHX9_eDBD_HT-SELEX
0.618
0.386
LHX9
M05173_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
LHX9_FL_HT-SELEX
0.618
0.386
LHX2
M09136_2.00
Homo sapiens
NBYTAATTRVNB
VNBYAATTARVN
Misc
Kulakovskiy et al.(2013)
LHX2_HUMAN.H11MO.0.A
0.618
0.386
Lhx2
M09169_2.00
Mus musculus
NNTAATKRGN
NCYMATTANN
Misc
Kulakovskiy et al.(2013)
LHX2_MOUSE.H11MO.0.A
0.618
0.386
Lhx2
M09562_2.00
Mus musculus
NYTAATTA
TAATTARN
Misc
Heinz et al.(2010)
HFSC-Lhx2_GSE48068
0.618
0.386
LHX2
M10655_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX2_Q4
0.618
0.386
LHX2
M10656_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX2_Q6
0.618
0.386
LHX9
M05171_2.00
Homo sapiens
YTAATTRS
SYAATTAR
SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_1
0.618
0.386
LHX9
M05172_2.00
Homo sapiens
HTAACGAB
VTCGTTAD
SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_2
0.618
0.386
LHX9
M05174_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_1
0.618
0.386
LHX9
M05175_2.00
Homo sapiens
HTAACGAB
VTCGTTAD
SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_2
0.618
0.386
Dlx4
M00409_2.00
Mus musculus
NWAATNDN
NHNATTWN
PBM
Berger et al.(2008)
Dlx4_3488
0.617
0.386
DLX4
M03112_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
DLX4_1
0.617
0.386
DLX4
M05002_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX4_eDBD_HT-SELEX
0.617
0.386
DLX4
M05005_2.00
Homo sapiens
NTAATTRB
VYAATTAN
SELEX
Yin et al.(2017)
DLX4_FL_HT-SELEX
0.617
0.386
DLX4
M05003_2.00
Homo sapiens
NTAAYRAB
VTYRTTAN
SELEX
Yin et al.(2017)
DLX4_eDBD_Methyl-HT-SELEX_1
0.617
0.386
DLX4
M05004_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX4_eDBD_Methyl-HT-SELEX_2
0.617
0.386
DLX4
M05006_2.00
Homo sapiens
NTAAYKAB
VTMRTTAN
SELEX
Yin et al.(2017)
DLX4_FL_Methyl-HT-SELEX_1
0.617
0.386
DLX4
M05007_2.00
Homo sapiens
NTAATTRB
VYAATTAN
SELEX
Yin et al.(2017)
DLX4_FL_Methyl-HT-SELEX_2
0.617
0.386
Rax
M00426_2.00
Mus musculus
NNTAATTRN
NYAATTANN
PBM
Berger et al.(2008)
Rax_3443
0.617
0.456
RAX
M03149_2.00
Homo sapiens
NHTAATTRNN
NNYAATTADN
SELEX
Jolma et al.(2013)
RAX_1
0.617
0.456
RAX2
M03214_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
RAXL1_1
0.617
0.456
Rx
M03840_2.00
Drosophila melanogaster
BTAATTRV
BYAATTAV
SELEX
Nitta et al.(2015)
Rx_1
0.617
0.456
Rx
M03841_2.00
Drosophila melanogaster
NTAATBNSATTAN
NTAATSNVATTAN
SELEX
Nitta et al.(2015)
Rx_2
0.617
0.456
RAX
M05142_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
RAX_eDBD_HT-SELEX
0.617
0.456
Rx
M06520_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Mathelier et al.(2014)
MA0202.1
0.617
0.456
Rx
M06317_2.00
Drosophila melanogaster
VYTAATTR
YAATTARB
B1H
Zhu et al.(2011)
Rx_Cell_FBgn0020617
0.617
0.456
Rx
M06318_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
Rx_SOLEXA_FBgn0020617
0.617
0.456
Rax
M10773_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RAX_04
0.617
0.456
RAX
M05143_2.00
Homo sapiens
NTAAYRNN
NNYRTTAN
SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_1
0.617
0.456
RAX
M05144_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_2
0.617
0.456
MIXL1
M03231_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
MIXL1_1
0.613
0.439
MIXL1
M05359_2.00
Homo sapiens
TAATBNVATTA
TAATBNVATTA
SELEX
Yin et al.(2017)
MIXL1_FL_HT-SELEX
0.613
0.439
MIXL1
M10747_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIXL1_02
0.613
0.439
MIXL1
M05360_2.00
Homo sapiens
TAATYNRATTA
TAATYNRATTA
SELEX
Yin et al.(2017)
MIXL1_FL_Methyl-HT-SELEX_1
0.613
0.439
MIXL1
M05361_2.00
Homo sapiens
TAATYDCRTTA
TAAYGHRATTA
SELEX
Yin et al.(2017)
MIXL1_FL_Methyl-HT-SELEX_2
0.613
0.439
Emx2
M00495_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.609
0.404
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN
NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.609
0.404
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.609
0.404
EMX2
M05281_2.00
Homo sapiens
YTAATKAB
VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.609
0.404
EMX2
M05282_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.609
0.404
mixl1.S
M02233_2.00
Xenopus laevis
NHTAATTAANN
NNTTAATTADN
PBM
Weirauch et al.(2014)
pTH6163
0.609
0.456
Mixl1
M10765_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIXL1_03
0.609
0.421
Mnx1
M00388_2.00
Mus musculus
NTAATBDNNN
NNNHVATTAN
PBM
Berger et al.(2008)
Hlxb9_3422
0.606
0.404
MNX1
M03143_2.00
Homo sapiens
NHTAATTRNH
DNYAATTADN
SELEX
Jolma et al.(2013)
MNX1_1
0.606
0.404
MNX1
M05126_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
0.606
0.404
MNX1
M05127_2.00
Homo sapiens
HTAAYGHB
VDCRTTAD
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
0.606
0.404
MNX1
M05128_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
0.606
0.404
unpg
M03836_2.00
Drosophila melanogaster
SSTAATYRVN
NBYRATTASS
SELEX
Nitta et al.(2015)
unpg_1
0.606
0.386
unpg
M06517_2.00
Drosophila melanogaster
BTAATTR
YAATTAV
B1H
Mathelier et al.(2014)
MA0251.1
0.606
0.386
unpg
M06311_2.00
Drosophila melanogaster
NBTAATTR
YAATTAVN
B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561
0.606
0.386
unpg
M06312_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561
0.606
0.386
PHDP
M03849_2.00
Drosophila melanogaster
NTAATKNVATTAN
NTAATBNMATTAN
SELEX
Nitta et al.(2015)
PHDP_1
0.606
0.456
PHDP
M06525_2.00
Drosophila melanogaster
HTAATTD
HAATTAD
B1H
Mathelier et al.(2014)
MA0457.1
0.606
0.456
PHDP
M06325_2.00
Drosophila melanogaster
HTAATT
AATTAD
B1H
Zhu et al.(2011)
PhdP_Cell_FBgn0025334
0.606
0.456
PHDP
M06326_2.00
Drosophila melanogaster
YTAATT
AATTAR
B1H
Zhu et al.(2011)
PhdP_SOLEXA_FBgn0025334
0.606
0.456
PHOX2B
M00282_2.00
Homo sapiens
TAATTRRY
RYYAATTA
PBM
Barrera et al.(2016)
PHOX2B_REF
0.603
0.456
Phox2a
M00400_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2a_3947
0.603
0.456
Phox2b
M00401_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2b_3948
0.603
0.456
PHOX2A
M03194_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2A_1
0.603
0.456
PHOX2B
M03113_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_1
0.603
0.456
PHOX2B
M03114_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_2
0.603
0.456
PHOX2A
M05244_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_HT-SELEX
0.603
0.456
PHOX2B
M05008_2.00
Homo sapiens
BTAATYRV
BYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_HT-SELEX
0.603
0.456
PHOX2B
M05010_2.00
Homo sapiens
TAATTWRATTA
TAATYWAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_HT-SELEX
0.603
0.456
Phox2a
M09564_2.00
Mus musculus
NTAATBNRATTA
TAATYNVATTAN
Misc
Heinz et al.(2010)
Neuron-Phox2a_GSE31456
0.603
0.456
PHOX2A
M05245_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_Methyl-HT-SELEX
0.603
0.456
PHOX2B
M05009_2.00
Homo sapiens
BTAATYRN
NYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_Methyl-HT-SELEX
0.603
0.456
PHOX2B
M05011_2.00
Homo sapiens
TAATTHRATTA
TAATYDAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_Methyl-HT-SELEX
0.603
0.456
PHOX2B
M00280_2.00
Homo sapiens
NNNHATAAWTDNN
NNHAWTTATDNNN
PBM
Barrera et al.(2016)
PHOX2B_R141G
0.603
0.439
PHOX2B
M00281_2.00
Homo sapiens
NNNNNNNNRY
RYNNNNNNNN
PBM
Barrera et al.(2016)
PHOX2B_R141Q
0.603
0.439
ap
M06478_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0209.1
0.602
0.351
ap
M06214_2.00
Drosophila melanogaster
VYTAATKA
TMATTARB
B1H
Zhu et al.(2011)
Ap_Cell_FBgn0000099
0.602
0.351
ap
M06215_2.00
Drosophila melanogaster
BAATHA
TDATTV
B1H
Zhu et al.(2011)
ap_FlyReg_FBgn0000099
0.602
0.351
ap
M06216_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Zhu et al.(2011)
Ap_SOLEXA_FBgn0000099
0.602
0.351
ap
M10781_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$AP_Q6
0.602
0.351
Lhx3
M00435_2.00
Mus musculus
NNNYAATHW
WDATTRNNN
PBM
Berger et al.(2008)
Lhx3_3431
0.600
0.421
Lhx3
M02687_2.00
Mus musculus
VRWTAATTAATTW
WAATTAATTAWYB
SELEX
Mathelier et al.(2014)
MA0135.1
0.600
0.421
LHX3
M09137_2.00
Homo sapiens
NYTAATTAAWTHH
DDAWTTAATTARN
Misc
Kulakovskiy et al.(2013)
LHX3_HUMAN.H11MO.0.C
0.600
0.421
Lhx3
M09188_2.00
Mus musculus
NYTRATKRV
BYMATYARN
Misc
Kulakovskiy et al.(2013)
LHX3_MOUSE.H11MO.0.C
0.600
0.421
Lhx3
M09570_2.00
Mus musculus
NNBTAATTAV
BTAATTAVNN
Misc
Heinz et al.(2010)
Neuron-Lhx3_GSE31456
0.600
0.421
LHX3
M10657_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX3A_01
0.600
0.421
LHX3
M10658_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX3b_01
0.600
0.421
LHX3
M10659_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LHX3_Q3
0.600
0.421
Lhx4
M00430_2.00
Mus musculus
NYAATHN
NDATTRN
PBM
Berger et al.(2008)
Lhx4_1719
0.600
0.404
Lim3
M02116_2.00
Drosophila melanogaster
NNNNNATBRN
NYVATNNNNN
PBM
Weirauch et al.(2014)
pTH6478
0.600
0.404
Lhx4
M03257_2.00
Mus musculus
BTAATTRN
NYAATTAV
SELEX
Jolma et al.(2013)
Lhx4_1
0.600
0.404
Lim3
M03796_2.00
Drosophila melanogaster
BTAATTAV
BTAATTAV
SELEX
Nitta et al.(2015)
Lim3_1
0.600
0.404
LHX4
M05063_2.00
Homo sapiens
BYAATYRV
BYRATTRV
SELEX
Yin et al.(2017)
LHX4_eDBD_HT-SELEX
0.600
0.404
LHX4
M05066_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
LHX4_FL_HT-SELEX
0.600
0.404
Lim3
M06492_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Mathelier et al.(2014)
MA0195.1
0.600
0.404
Lim3
M06258_2.00
Drosophila melanogaster
HHTAATKA
TMATTADD
B1H
Zhu et al.(2011)
Lim3_Cell_FBgn0002023
0.600
0.404
Lim3
M06259_2.00
Drosophila melanogaster
HTRATTR
YAATYAD
B1H
Zhu et al.(2011)
Lim3_SOLEXA_FBgn0002023
0.600
0.404
LHX4
M05064_2.00
Homo sapiens
BYAATTRV
BYAATTRV
SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_1
0.600
0.404
LHX4
M05065_2.00
Homo sapiens
NTWAYGHN
NDCRTWAN
SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_2
0.600
0.404
LHX4
M05067_2.00
Homo sapiens
NYAATTRN
NYAATTRN
SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_1
0.600
0.404
LHX4
M05068_2.00
Homo sapiens
NTAAYGHN
NDCRTTAN
SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_2
0.600
0.404
ceh-23
M00671_2.00
Caenorhabditis elegans
HTAATTRNNN
NNNYAATTAD
PBM
Narasimhan et al.(2015)
pTH9478
0.600
0.386
Q0N4F9_NEMVE
M02162_2.00
Nematostella vectensis
DTAATTAK
MTAATTAH
PBM
Weirauch et al.(2014)
pTH6150
0.600
0.386
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP160290
Homeodomain
21
77
PRNRTKYTAAQLNALESLFMVSQYPDSLCLEDLCKSLGVTVERIQIWFQNRRSKFKR
Links
Other
Homeodomain
family TFs
Other
Lottia gigantea
TFs
2140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy