CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_149-fgenesh-gene-0.12
(
Pythium aphanidermatum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
maker-pag1_scaffold_149-fgenesh-gene-0.12
T220396_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000017530
Homeodomain
285
349
RLYSPLQVKKLQEWYYSYPRPLTDELTLMRTILNYRPFANPFVLGGLTIAHVRDWFKRRRYRERV
EPrPA00000017530
Homeodomain
598
664
RPMKFSMKQVMQLEAWFQQKYKPSQAEMEGYLDALNAPPLRDEKQPMDVNMTQLRRWFNKRRCLRRP
Links
Other
Homeodomain
family TFs
Other
Pythium aphanidermatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_322-snap-gene-0.15
Pythium arrhenomanes
maker-par_contig_322-snap-gene-0.15
N
0.838
Physo130359
Phytophthora sojae
Physo130359
N
0.811
PYU1_G006167
Pythium ultimum
PYU1_G006167
N
0.807
maker-pir_contig_546-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_546-fgenesh-gene-0.1
N
0.775
PITG_13845
Phytophthora infestans
PITG_13845
N
0.773
estExt_fgenesh1_kg.C_30538
Phytophthora capsici
estExt_fgenesh1_kg.C_30538
N
0.773
F443_05152
Phytophthora parasitica
F443_05152
N
0.773
fgenesh_scip_prom.28083.4657
Phytophthora lateralis
fgenesh_scip_prom.28083.4657
N
0.770
Phyra76743
Phytophthora ramorum
Phyra76743
N
0.770
maker-piw_contig_12-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_12-fgenesh-gene-0.1
N
0.760
ALNC14_142750
Albugo laibachii
ALNC14_142750
N
0.742
maker-pve_contig_133-fgenesh-gene-0.7
Pythium vexans
maker-pve_contig_133-fgenesh-gene-0.7
N
0.721
HpaG812689
Hyaloperonospora arabidopsidis
HpaG812689
N
0.703
SPRG_15862
Saprolegnia parasitica
SPRG_15862
N
0.674
fgenesh_scip_prom.46568.9178
Phytophthora kernoviae
fgenesh_scip_prom.46568.9178
N
0.634