CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCER_100403
(
Nosema ceranae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NCER_100403
T220939_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ISX
M00319_2.00
Homo sapiens
DTAATTRK
MYAATTAH
PBM
Barrera et al.(2016)
ISX_REF
0.601
0.351
Isx
M00452_2.00
Mus musculus
NNHDATNN
NNATHDNN
PBM
Berger et al.(2008)
Isx_3445
0.601
0.351
ISX
M03218_2.00
Homo sapiens
NTAATTARATTAN
NTAATYTAATTAN
SELEX
Jolma et al.(2013)
ISX_1
0.601
0.351
ISX
M03219_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Jolma et al.(2013)
ISX_2
0.601
0.351
ISX
M03220_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
ISX_3
0.601
0.351
ISX
M05304_2.00
Homo sapiens
BTAATTRG
CYAATTAV
SELEX
Yin et al.(2017)
ISX_eDBD_HT-SELEX
0.601
0.351
ISX
M05307_2.00
Homo sapiens
YTAATTRS
SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_HT-SELEX
0.601
0.351
ISX
M05305_2.00
Homo sapiens
NTAATTAG
CTAATTAN
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_1
0.601
0.351
ISX
M05306_2.00
Homo sapiens
HTAAYGHN
NDCRTTAD
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_2
0.601
0.351
ISX
M05308_2.00
Homo sapiens
YTAATTRS
SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_1
0.601
0.351
ISX
M05309_2.00
Homo sapiens
HTAAYGHN
NDCRTTAD
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_2
0.601
0.351
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEQ82830
Homeodomain
41
97
RRVRTVMSPYQSKILHECFCKNPFPSTELREELSRVLKMKPRTIQIWFQNQRQKSKN
Links
Other
Homeodomain
family TFs
Other
Nosema ceranae
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy