CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g136480
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
NEMVEDRAFT_v1g136480
T221002_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEMVEDRAFT_v1g136480
M02147_2.00
Nematostella vectensis
NNNNNNNNNN
NNNNNNNNNN
PBM
Weirauch et al.(2014)
pTH6103
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02147_2.00
Homeodomain
1
57
RRNRTKFTAYQLEQLEDAYQKAKYPDVQARETLAQRLGVAESRVQVWFSNRRSKGKR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO31656
Homeodomain
165
221
RRNRTKFTAYQLEQLEDAYQKAKYPDVQARETLAQRLGVAESRVQVWFSNRRSKGKR
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACHR007975
Anopheles christyi
ACHR007975
I
0.716
AEPI007688
Anopheles epiroticus
AEPI007688
I
0.716
ACUA016236
Anopheles culicifacies
ACUA016236
I
0.716
AFUN004920
Anopheles funestus
AFUN004920
I
0.716
AQUA000003
Anopheles quadriannulatus
AQUA000003
I
0.716
LotgiG80560
Lottia gigantea
LotgiG80560
I
0.706
ENSCSAVG00000005353
Ciona savignyi
ENSCSAVG00000005353
I
0.704
LDEC011614
Leptinotarsa decemlineata
LDEC011614
I
0.704
pax3/7-like
Ciona intestinalis
ENSCING00000013561
I
0.704
Ocbimv22007835m.g
Octopus bimaculoides
Ocbimv22007835m.g
I
0.704
HHAL002779-PA
Halyomorpha halys
HHAL002779-PA
I
0.702
SMTD_0001329401
Schistosoma mattheei
SMTD_0001329401
I
0.658
SROB_0000988801
Schistosoma rodhaini
SROB_0000988801
I
0.658
TRE_0000697601
Trichobilharzia regenti
TRE_0000697601
I
0.658
A_06809
Schistosoma haematobium
A_06809
I
0.658
ENSMLUG00000025025
Myotis lucifugus
ENSMLUG00000025025
I
0.654
ENSMLUG00000026513
Myotis lucifugus
ENSMLUG00000026513
I
0.654
Ppa-ceh-8
Pristionchus pacificus
PPA03443
I
0.637
ENSMLUG00000002244
Myotis lucifugus
ENSMLUG00000002244
I
0.635
CapteG228124
Capitella teleta
CapteG228124
I
0.633
ACEP15305
Atta cephalotes
ACEP15305
I
0.627
Cflo_06474--XP_394848.3_APIME
Camponotus floridanus
Cflo_06474--XP_394848.3_APIME
I
0.627
SINV15875
Solenopsis invicta
SINV15875
I
0.627
SPU_006787
Strongylocentrotus purpuratus
SPU_006787
I
0.627
ANCDUO_04304
Ancylostoma duodenale
ANCDUO_04304
I
0.625
BTMF_0001218901
Brugia timori
BTMF_0001218901
I
0.625
CGOC_0000172601
Cylicostephanus goldi
CGOC_0000172601
I
0.625
ASU_08111
Ascaris suum
ASU_08111
I
0.625
L596_g12356
Steinernema carpocapsae
L596_g12356
I
0.625
SNAPOd2T00015303001
Oikopleura dioica
SNAPOd2T00015303001
I
0.625
WUBG_04585
Wuchereria bancrofti
WUBG_04585
I
0.625
DICVIV_11711
Dictyocaulus viviparus
DICVIV_11711
I
0.625
ANCCAN_00245
Ancylostoma caninum
ANCCAN_00245
I
0.625
ANCCEY_08415
Ancylostoma ceylanicum
ANCCEY_08415
I
0.625
HPLM_0000341801
Haemonchus placei
HPLM_0000341801
I
0.625
NECAME_04523
Necator americanus
NECAME_04523
I
0.625
nDi.2.2.2.g03676
Dirofilaria immitis
nDi.2.2.2.g03676
I
0.625
nLs.2.1.2.g01340
Litomosoides sigmodontis
nLs.2.1.2.g01340
I
0.625
OESDEN_03125
Oesophagostomum dentatum
OESDEN_03125
I
0.625
TCLT_0000211001
Thelazia callipaeda
TCLT_0000211001
I
0.625
OFLC_0000197901
Onchocerca flexuosa
OFLC_0000197901
I
0.625
NBR_0001845501
Nippostrongylus brasiliensis
NBR_0001845501
I
0.625
nAv.1.0.1.g05049
Acanthocheilonema viteae
nAv.1.0.1.g05049
I
0.625
L889_g29911
Steinernema feltiae
L889_g29911
I
0.625
SMUV_0001111201
Syphacia muris
SMUV_0001111201
I
0.625
L893_g1042
Steinernema glaseri
L893_g1042
I
0.625
TELCIR_00312
Teladorsagia circumcincta
TELCIR_00312
I
0.625
L898_g33070
Steinernema monticolum
L898_g33070
I
0.625
EVEC_0000950501
Enterobius vermicularis
EVEC_0000950501
I
0.625
Bm3369
Brugia malayi
Bm3369
I
0.625
SMAR006838
Strigamia maritima
SMAR006838
I
0.625
WBGene00241133
Onchocerca volvulus
WBGene00241133
I
0.625
LOAG_18403
Loa loa
LOAG_18403
I
0.625
LLOJ006069
Lutzomyia longipalpis
LLOJ006069
I
0.624
LDEC009603
Leptinotarsa decemlineata
LDEC009603
I
0.624
LCUP015672
Lucilia cuprina
LCUP015672
I
0.624
YQE_06850
Dendroctonus ponderosae
YQE_06850
I
0.624
ey
Drosophila melanogaster
FBgn0005558
D
0.624
BGIBMGA009546
Bombyx mori
BGIBMGA009546
I
0.624
PHUM217100
Pediculus humanus
PHUM217100
I
0.624
LCUP013026
Lucilia cuprina
LCUP013026
I
0.624
PPAI007516
Phlebotomus papatasi
PPAI007516
I
0.624
HMEL012214
Heliconius melpomene
HMEL012214
I
0.624
YQE_05108
Dendroctonus ponderosae
YQE_05108
I
0.624
KGM_18864
Danaus plexippus
KGM_18864
I
0.624
ENSPFOG00000006769
Poecilia formosa
ENSPFOG00000006769
I
0.623
nRc.2.0.1.g25805
Romanomermis culicivorax
nRc.2.0.1.g25805
I
0.623
ENSPFOG00000004477
Poecilia formosa
ENSPFOG00000004477
I
0.623
CJA11736
Caenorhabditis japonica
CJA11736
I
0.623
pax10
Gasterosteus aculeatus
ENSGACG00000007835
I
0.623
ENSMGAG00000001533
Meleagris gallopavo
ENSMGAG00000001533
I
0.623
CBG04483
Caenorhabditis briggsae
CBG04483
I
0.623
ENSONIG00000020082
Oreochromis niloticus
ENSONIG00000020082
I
0.623
ENSPPYG00000029808
Pongo abelii
ENSPPYG00000029808
I
0.623
ENSGMOG00000007260
Gadus morhua
ENSGMOG00000007260
I
0.623
ENSLOCG00000017168
Lepisosteus oculatus
ENSLOCG00000017168
I
0.623
PAX6
Choloepus hoffmanni
ENSCHOG00000001954
I
0.623
XP_002938577
Xenopus tropicalis
XP_002938577
I
0.623
Tal_R002183
Tyto alba
Tal_R002183
I
0.623
Brh_R002767
Buceros rhinoceros
Brh_R002767
I
0.623
ENSACAG00000013797
Anolis carolinensis
ENSACAG00000013797
I
0.623
Pax6
Mus musculus
ENSMUSG00000027168
D
0.623
vab-3
Caenorhabditis elegans
WBGene00006870
I
0.623
ENSAMXG00000021103
Astyanax mexicanus
ENSAMXG00000021103
I
0.623
pax10
Danio rerio
ENSDARG00000053364
I
0.622
CLEC008732
Cimex lectularius
CLEC008732
I
0.622
ENSAMXG00000010055
Astyanax mexicanus
ENSAMXG00000010055
I
0.622
ACEP19559
Atta cephalotes
ACEP19559
I
0.622
AMEM005969
Anopheles merus
AMEM005969
I
0.621
AMAM022462
Anopheles maculatus
AMAM022462
I
0.621
Cmyd_10010531
Chelonia mydas
Cmyd_10010531
I
0.619
ENSXMAG00000017245
Xiphophorus maculatus
ENSXMAG00000017245
I
0.619
Pax3
Dipodomys ordii
ENSDORG00000010324
I
0.619
ENSAPLG00000011062
Anas platyrhynchos
ENSAPLG00000011062
I
0.619
Ocbimv22021713m.g
Octopus bimaculoides
Ocbimv22021713m.g
I
0.619
PAX3
Vicugna pacos
ENSVPAG00000000715
I
0.619
ENSMGAG00000004645
Meleagris gallopavo
ENSMGAG00000004645
I
0.619
Tal_R002397
Tyto alba
Tal_R002397
I
0.619
ECPE_0000989001
Echinostoma caproni
ECPE_0000989001
I
0.618
MESCA001873
Megaselia scalaris
MESCA001873
I
0.618
D915_05710
Fasciola hepatica
D915_05710
I
0.618
YQE_12757
Dendroctonus ponderosae
YQE_12757
I
0.617
ACYPI067723
Acyrthosiphon pisum
ACYPI067723
I
0.617
PAX6
Erinaceus europaeus
ENSEEUG00000014014
I
0.617
CLEC009744
Cimex lectularius
CLEC009744
I
0.617
HHAL001220-PA
Halyomorpha halys
HHAL001220-PA
I
0.617
DAPPUDRAFT_9094
Daphnia pulex
DAPPUDRAFT_9094
I
0.616
LCUP011798
Lucilia cuprina
LCUP011798
I
0.616
BGLB009051
Biomphalaria glabrata
BGLB009051
I
0.615
CPIJ014198
Culex quinquefasciatus
CPIJ014198
I
0.613
AQUA006727
Anopheles quadriannulatus
AQUA006727
I
0.613
ACHR005004
Anopheles christyi
ACHR005004
I
0.613
ACUA006364
Anopheles culicifacies
ACUA006364
I
0.613
ADIR009742
Anopheles dirus
ADIR009742
I
0.613
AARA005848
Anopheles arabiensis
AARA005848
I
0.613
AALB001245
Anopheles albimanus
AALB001245
I
0.613
YQE_12760
Dendroctonus ponderosae
YQE_12760
I
0.613
CpipJ_CPIJ014198
Culex pipiens
CpipJ_CPIJ014198
I
0.613
AEPI009864
Anopheles epiroticus
AEPI009864
I
0.613
AFAF020744
Anopheles farauti
AFAF020744
I
0.613
KGM_00017
Danaus plexippus
KGM_00017
I
0.613
AMAM010839
Anopheles maculatus
AMAM010839
I
0.613
AMIN006554
Anopheles minimus
AMIN006554
I
0.613
AFUN002667
Anopheles funestus
AFUN002667
I
0.613
nOo.2.0.1.g09807
Onchocerca ochengi
nOo.2.0.1.g09807
I
0.611
GPUH_0000746301
Gongylonema pulchrum
GPUH_0000746301
I
0.605
NEMVEDRAFT_v1g119152
Nematostella vectensis
NEMVEDRAFT_v1g119152
I
0.602