ONIVA11G03780 (Oryza nivara)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ONIVA11G03780 T221699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.843 0.755
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.626 0.551
MEIS3
M03093_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.602 0.429
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.602 0.429
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.602 0.429
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR

YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.602 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA11G03780.1 Homeodomain 369 420

Links

Other Homeodomain family TFs
Other Oryza nivara TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_01859 Arthroderma benhamiae ARB_01859 I 0.000
MCYG_06533 Arthroderma otae MCYG_06533 I 0.000
CaO19.11817 Candida albicans CaO19.11817 I 0.000
CaO19.4342 Candida albicans CaO19.4342 I 0.000
CD36_52920 Candida dubliniensis CD36_52920 I 0.000
CAGL0L09383g Candida glabrata CAGL0L09383g I 0.000
G210_3265 Candida maltosa G210_3265 I 0.000
CTRG_05555 Candida tropicalis CTRG_05555 I 0.000
KAFR_0C03230 Kazachstania africana KAFR_0C03230 I 0.000
KNAG_0E03440 Kazachstania naganishii KNAG_0E03440 I 0.000
KLTH0G17050g Kluyveromyces thermotolerans KLTH0G17050g I 0.000
Kwal_1524 Kluyveromyces waltii Kwal_1524 I 0.000
LALA0_S09e06612g Lachancea lanzarotensis LALA0_S09e06612g I 0.000
KLTH0G17050g Lachancea thermotolerans KLTH0G17050g I 0.000
NDAI_0G03660 Naumovozyma dairenensis NDAI_0G03660 I 0.000
8334_YGL162W Saccharomyces bayanus 8334_YGL162W I 0.000
SUT1 Saccharomyces cerevisiae YGL162W D 0.000
SKUD_204202 Saccharomyces kudriavzevii SKUD_204202 I 0.000
SKUD_166402 Saccharomyces kudriavzevii SKUD_166402 I 0.000
7247_YGL162W Saccharomyces mikatae 7247_YGL162W I 0.000
7806_YGL162W Saccharomyces paradoxus 7806_YGL162W I 0.000
TBLA_0C00140 Tetrapisispora blattae TBLA_0C00140 I 0.000
TDEL_0C01380 Torulaspora delbrueckii TDEL_0C01380 I 0.000