ORUFI06G19620 (Oryza rufipogon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORUFI06G19620 T221940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.864 0.820
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.604 0.440
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI06G19620.1 Homeodomain 457 509

Links

Other Homeodomain family TFs
Other Oryza rufipogon TFs

953 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G387485 Zea mays GRMZM2G387485 N 0.000
LPERR06G23780 Leersia perrieri LPERR06G23780 N 0.000
OB06G36080 Oryza brachyantha OB06G36080 N 0.000
OBART06G28330 Oryza barthii OBART06G28330 N 0.000
OGLUM06G29720 Oryza glumaepatula OGLUM06G29720 N 0.000
OLONG_013922 Oryza longistaminata OLONG_013922 N 0.000
ONIVA06G31450 Oryza nivara ONIVA06G31450 N 0.000
ORUFI06G30250 Oryza rufipogon ORUFI06G30250 N 0.000
Pavir.Db00082 Panicum virgatum Pavir.Db00082 N 0.000
Pavir.J04848 Panicum virgatum Pavir.J04848 N 0.000
Si005834m.g Setaria italica Si005834m.g N 0.000
Traes_7AL_153E1A74A Triticum aestivum Traes_7AL_153E1A74A N 0.000