ORUFI10G09770 (Oryza rufipogon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORUFI10G09770 T221966_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.857 0.857
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.857 0.857
estExt_gwp_gw1.C_70211
M02220_2.00
Physcomitrella patens
HMATNANDNN

NNHNTNATKD
PBM
Weirauch et al.(2014)
pTH8489
0.829 0.839
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.817 0.804
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.817 0.804
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.817 0.804
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.817 0.804
ATHB-16
M02050_2.00
Arabidopsis thaliana
YAATMATT

AATKATTR
PBM
Weirauch et al.(2014)
pTH7270
0.800 0.768
HAT5
M06914_2.00
Arabidopsis thaliana
NHAATAATTDW

WHAATTATTDN
Dap-seq
OMalley et al.(2016)
HAT5_col_a
0.796 0.804
HAT5
M06915_2.00
Arabidopsis thaliana
WNYAATAATTRWDN

NHWYAATTATTRNW
Dap-seq
OMalley et al.(2016)
HAT5_colamp_a
0.796 0.804
HAT5
M02683_2.00
Arabidopsis thaliana
SCAATAATTNNV

BNNAATTATTGS
SELEX
Mathelier et al.(2014)
MA0008.2
0.796 0.804
HAT5
M10624_2.00
Arabidopsis thaliana
YSCAATAATTNNVN

NBNNAATTATTGSR
Transfac
Matys et al.(2006)
P$ATHB1_01
0.796 0.804
ATHB-6
M02040_2.00
Arabidopsis thaliana
HATNATTDN

NHAATNATD
PBM
Weirauch et al.(2014)
pTH7670
0.796 0.768
ATHB-6
M06909_2.00
Arabidopsis thaliana
NNNHATKATTR

YAATMATDNNN
Dap-seq
OMalley et al.(2016)
ATHB6_col_a
0.796 0.768
ATHB-6
M06910_2.00
Arabidopsis thaliana
NCAATAATTRN

NYAATTATTGN
Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a
0.796 0.768
ATHB-21
M06907_2.00
Arabidopsis thaliana
NNWHCAATWATTDN

NHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB21_col_a
0.738 0.696
ATHB-21
M06908_2.00
Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN

NNAHCAATWATTDNNNHHWW
Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a
0.738 0.696
HB-5
M06924_2.00
Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH

DWWDNNNHMAATWATTGDTNN
Dap-seq
OMalley et al.(2016)
ATHB40_col_a
0.736 0.643
HB-5
M06925_2.00
Arabidopsis thaliana
HHAATWATTGDWNN

NNWHCAATWATTDD
Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a
0.736 0.643
ATHB-53
M06934_2.00
Arabidopsis thaliana
HMAATAATTRD

HYAATTATTKD
Dap-seq
OMalley et al.(2016)
ATHB53_col_a
0.731 0.607
ATHB-53
M06935_2.00
Arabidopsis thaliana
NNWHCAATWATTDDN

NHHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a
0.731 0.607
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.719 0.857
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.719 0.857
ATHB-20
M06912_2.00
Arabidopsis thaliana
HYAATAATTRD

HYAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_col_a
0.698 0.804
ATHB-20
M06913_2.00
Arabidopsis thaliana
HYAATMATTRD

HYAATKATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a
0.698 0.804
ATHB-7
M02043_2.00
Arabidopsis thaliana
NHWTGATTGN

NCAATCAWDN
PBM
Weirauch et al.(2014)
pTH8090
0.604 0.661
ATHB-7
M06911_2.00
Arabidopsis thaliana
NHYCAATCATTSW

WSAATGATTGRDN
Dap-seq
OMalley et al.(2016)
ATHB7_col_a
0.604 0.661
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI10G09770.1 Homeodomain 107 162

Links

Other Homeodomain family TFs
Other Oryza rufipogon TFs

819 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GMEB1 Homo sapiens ENSG00000162419 D 0.000
GMEB2 Meleagris gallopavo ENSMGAG00000006922 D 0.000
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D 0.000
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D 0.000
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.000
Gmeb1 Mus musculus ENSMUSG00000028901 D 0.000
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D 0.000
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.000
GMEB2 Homo sapiens ENSG00000101216 D 0.000
GMEB2 Anolis carolinensis ENSACAG00000011613 D 0.000
gmeb1.S Xenopus laevis XB-GENE-1002174 D 0.000
gmeb1 Xenopus tropicalis XB-GENE-1002169 D 0.000
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I 0.000
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I 0.000
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I 0.000
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I 0.000
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I 0.000
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I 0.000
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I 0.000
GMEB1 Sorex araneus ENSSARG00000001145 I 0.000
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I 0.000
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I 0.000
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.000
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.000
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I 0.000
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I 0.000
gmeb1 Oryzias latipes ENSORLG00000008294 I 0.000
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I 0.000
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.000
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I 0.000
GMEB2 Procavia capensis ENSPCAG00000000522 I 0.000
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I 0.000
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I 0.000
GMEB2 Pan troglodytes ENSPTRG00000013744 I 0.000
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I 0.000
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.000
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I 0.000
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I 0.000
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I 0.000
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I 0.000
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I 0.000
ENSMMUP00000008108 Macaca fascicularis ENSMMUP00000008108 I 0.000
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I 0.000
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.000
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.000
Gfo_R005287 Geospiza fortis Gfo_R005287 I 0.000
Gfo_R008934 Geospiza fortis Gfo_R008934 I 0.000
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.000
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I 0.000
Ogr01986 Ophisaurus gracilis Ogr01986 I 0.000
Ogr06841 Ophisaurus gracilis Ogr06841 I 0.000
Pvit_01323 Pogona vitticeps Pvit_01323 I 0.000
Pvit_15570 Pogona vitticeps Pvit_15570 I 0.000
Tal_R007596 Tyto alba Tal_R007596 I 0.000
AAH84751 Xenopus laevis AAH84751 I 0.000
gmeb2 Xenopus tropicalis XB-GENE-5755487 I 0.000
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I 0.000
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I 0.000
GMEB1 Takifugu rubripes ENSTRUG00000011964 I 0.000
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I 0.000
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I 0.000
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.000
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.000
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.000
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I 0.000
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I 0.000
Aan_R005833 Calypte anna Aan_R005833 I 0.000
Afo_R008896 Aptenodytes forsteri Afo_R008896 I 0.000
Afo_R010444 Aptenodytes forsteri Afo_R010444 I 0.000
Alligator_sinensis_CCG018614.2 Alligator sinensis Alligator_sinensis_CCG018614.2 I 0.000
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I 0.000
Brh_R002176 Buceros rhinoceros Brh_R002176 I 0.000
Brh_R012802 Buceros rhinoceros Brh_R012802 I 0.000
gmeb2.S Xenopus laevis XB-GENE-5755500 I 0.000
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I 0.000
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I 0.000
gmeb1 Danio rerio ENSDARG00000062060 I 0.000
GMEB2 Danio rerio ENSDARG00000093240 I 0.000
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.000
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I 0.000
GMEB1 Equus caballus ENSECAG00000009764 I 0.000
GMEB2 Equus caballus ENSECAG00000019377 I 0.000
GMEB2 Erinaceus europaeus ENSEEUG00000001478 I 0.000
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.000
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I 0.000
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I 0.000
GMEB1 Felis catus ENSFCAG00000018209 I 0.000
GMEB2 Felis catus ENSFCAG00000031273 I 0.000
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I 0.000
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I 0.000
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.000
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.000
ENSAMXG00000001001 Astyanax mexicanus ENSAMXG00000001001 I 0.000
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I 0.000
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I 0.000
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I 0.000
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I 0.000
GMEB1 Bos taurus ENSBTAG00000001160 I 0.000
GMEB2 Bos taurus ENSBTAG00000014769 I 0.000
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.000
GMEB2 Canis familiaris ENSCAFG00000013008 I 0.000
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.000
GMEB2 Callithrix jacchus ENSCJAG00000010283 I 0.000
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.000
GMEB2 Cavia porcellus ENSCPOG00000025567 I 0.000
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I 0.000
gmeb1 Gasterosteus aculeatus ENSGACG00000007791 I 0.000
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I 0.000
GMEB2 Myotis lucifugus ENSMLUG00000014606 I 0.000
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I 0.000
GMEB1 Macaca mulatta ENSMMUG00000011390 I 0.000
GMEB2 Monodelphis domestica ENSMODG00000016974 I 0.000
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I 0.000
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.000
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.000
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I 0.000
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I 0.000
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I 0.000
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.000
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I 0.000
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.000
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I 0.000
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.000
GMEB2 Microcebus murinus ENSMICG00000010614 I 0.000
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I 0.000
GMEB2 Gorilla gorilla ENSGGOG00000008653 I 0.000
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.000
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I 0.000
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I 0.000
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I 0.000
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I 0.000
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I 0.000
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.000
GMEB2 Loxodonta africana ENSLAFG00000012335 I 0.000
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I 0.000
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I 0.000
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I 0.000
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I 0.000
GMEB2 Otolemur garnettii ENSOGAG00000008826 I 0.000