Phyra73700 (Phytophthora ramorum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Phyra73700 T222360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra73700
M02158_2.00		 Phytophthora ramorum
NTGAYDNNBN
NVNNHRTCAN		 PBM
Weirauch et al.(2014)
pTH7815		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02158_2.00 Homeodomain 51 110

DNA Binding Domains

Protein ID Domain From To Sequence
Phyra73700 Homeodomain 125 184

Links

Other Homeodomain family TFs
Other Phytophthora ramorum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_10203 Saprolegnia parasitica SPRG_10203 I 0.867
maker-pir_contig_1826-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_1826-fgenesh-gene-0.0 I 0.867
Physo130644 Phytophthora sojae Physo130644 I 0.867
PITG_15721 Phytophthora infestans PITG_15721 I 0.867
PITG_20186 Phytophthora infestans PITG_20186 I 0.867
PYU1_G003772 Pythium ultimum PYU1_G003772 I 0.867
F443_21000 Phytophthora parasitica F443_21000 I 0.867
HpaG810406 Hyaloperonospora arabidopsidis HpaG810406 I 0.867
fgenesh_scip_prom.28083.11333 Phytophthora lateralis fgenesh_scip_prom.28083.11333 I 0.867
fgenesh1_kg.C_scaffold_948000003 Phytophthora capsici fgenesh1_kg.C_scaffold_948000003 I 0.867
maker-pve_contig_1085-snap-gene-0.4 Pythium vexans maker-pve_contig_1085-snap-gene-0.4 I 0.865
maker-par_contig_2027-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_2027-fgenesh-gene-0.1 I 0.863
maker-pag1_scaffold_379-fgenesh-gene-0.5 Pythium aphanidermatum maker-pag1_scaffold_379-fgenesh-gene-0.5 I 0.863
ALNC14_070290 Albugo laibachii ALNC14_070290 I 0.799