CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Q0ZPQ8_NEMVE
(
Nematostella vectensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Q0ZPQ8_NEMVE
T222835_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q0ZPQ8_NEMVE
M02168_2.00
Nematostella vectensis
NHGACRNNN
NNNYGTCDN
PBM
Weirauch et al.(2014)
pTH6353
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q0N4E7_NEMVE
M02161_2.00
Nematostella vectensis
TGACRNNN
NNNYGTCA
PBM
Weirauch et al.(2014)
pTH5333
0.813
0.982
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02168_2.00
Homeodomain
1
58
KRRGKLPESARTRLMTWLFAHSNRPYPTEEEKSNLATITGLTPIQINNWFSNARRRIL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q0ZPQ8_NEMVE
Homeodomain
3
60
KRRGKLPESARTRLMTWLFAHSNRPYPTEEEKSNLATITGLTPIQINNWFSNARRRIL
Links
Other
Homeodomain
family TFs
Other
Nematostella vectensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q0N4E7_NEMVE
Nematostella vectensis
Q0N4E7_NEMVE
D
0.813