CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_417475
(
Selaginella moellendorffii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SELMODRAFT_417475
T223099_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GRMZM2G087741
M02138_2.00
Zea mays
NNTGACRKCN
NGMYGTCANN
PBM
Weirauch et al.(2014)
pTH5816
0.620
0.426
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ21605
Homeodomain
24
80
MKTLMKSYIRGLMEDCFKKKKKKKFPKGDEKSNLAQSTWLKPRQINNWFINQRKRHW
Links
Other
Homeodomain
family TFs
Other
Selaginella moellendorffii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G087741
Zea mays
GRMZM2G087741
D
0.620