CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_175710
(
Schistosoma mansoni
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Smp_175710
T223513_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
phx1
M02173_2.00
Schizosaccharomyces pombe
NWTTAATTANN
NNTAATTAAWN
PBM
Weirauch et al.(2014)
pTH6047
0.600
0.364
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_175710.1:pep
Homeodomain
126
180
LEQVQTGQQLTELELVFRVSHYPSMIVREELAQRLGLPESRIQVWFQNRRAKWRK
Links
Other
Homeodomain
family TFs
Other
Schistosoma mansoni
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM036157
Anopheles coluzzii
ACOM036157
I
0.615
AGAP000858
Anopheles gambiae
AGAP000858
I
0.615
UNCX
Gorilla gorilla
ENSGGOG00000002642
I
0.604
HHAL000370-PA
Halyomorpha halys
HHAL000370-PA
I
0.602
phx1
Schizosaccharomyces pombe
SPAC32A11.03c
D
0.600