Solyc02g083950.2 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc02g083950.2 T223555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.808 0.807
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.808 0.807
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g083950.2.1 Homeodomain 23 85

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

467 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI1G69617 Brachypodium distachyon BRADI1G69617 N 0.000
Sb01g042570 Sorghum bicolor Sb01g042570 N 0.000
ORUFI03G08860 Oryza rufipogon ORUFI03G08860 N 0.000
ORGLA03G0084800 Oryza glaberrima ORGLA03G0084800 N 0.000
OPUNC03G08410 Oryza punctata OPUNC03G08410 N 0.000
ONIVA06G00900 Oryza nivara ONIVA06G00900 N 0.000
OMERI02G18080 Oryza meridionalis OMERI02G18080 N 0.000
OLONG_014784 Oryza longistaminata OLONG_014784 N 0.000
OGLUM03G08850 Oryza glumaepatula OGLUM03G08850 N 0.000
OBART03G08740 Oryza barthii OBART03G08740 N 0.000
MLOC_50895 Hordeum vulgare MLOC_50895 N 0.000
GRMZM5G894234 Zea mays GRMZM5G894234 N 0.000
GRMZM2G342647 Zea mays GRMZM2G342647 N 0.000
GRMZM2G077045 Zea mays GRMZM2G077045 N 0.000
F775_14771 Aegilops tauschii F775_14771 N 0.000
Pavir.Ib00786 Panicum virgatum Pavir.Ib00786 N 0.000