CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCM_000062
(
Theobroma cacao
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
TCM_000062
T223880_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WOX13
M02049_2.00
Arabidopsis thaliana
YTGATTGA
TCAATCAR
PBM
Weirauch et al.(2014)
pTH6461
0.867
0.930
WOX13
M00866_2.00
Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN
PBM
Franco-Zorrilla et al.(2014)
WOX13
0.867
0.930
GRMZM2G038252
M02137_2.00
Zea mays
HTRATTGV
BCAATYAD
PBM
Weirauch et al.(2014)
pTH6141
0.854
0.895
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX90654
Homeodomain
97
158
ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKR
EOX90655
Homeodomain
97
158
ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKR
EOX90656
Homeodomain
97
158
ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKR
Links
Other
Homeodomain
family TFs
Other
Theobroma cacao
TFs
346 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy