TRIUR3_26432 (Triticum urartu)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TRIUR3_26432 T224367_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV

BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.781 0.649
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN

NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.781 0.632
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN

NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.781 0.632
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT

AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.758 0.684
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN

NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.733 0.632
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW

WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.733 0.632
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN

NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.733 0.632
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN

NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.731 0.632
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD

HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.731 0.632
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN

NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.708 0.649
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV

BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.708 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRIUR3_26432-P1 Homeodomain 95 151

Links

Other Homeodomain family TFs
Other Triticum urartu TFs

693 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30131.m007272 Ricinus communis 30131.m007272 I 0.000
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N 0.000
HMGB7 Arabidopsis thaliana AT5G23420 N 0.000
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.000
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.000
Bo2g160920 Brassica oleracea Bo2g160920 I 0.000
Bo9g014140 Brassica oleracea Bo9g014140 I 0.000
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N 0.000
Bra026498 Brassica rapa Bra026498 I 0.000
Bra029371 Brassica rapa Bra029371 I 0.000
BRADI3G12920 Brachypodium distachyon BRADI3G12920 I 0.000
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.000
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.000
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.000
Cla009222 Citrullus lanatus Cla009222 I 0.000
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.000
ENSMMUP00000037751 Macaca fascicularis ENSMMUP00000037751 N 0.000
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I 0.000
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N 0.000
fgenesh1_pg.4_#_114 Coccomyxa subellipsoidea C169 fgenesh1_pg.4_#_114 N 0.000
fgenesh2_kg.6__1935__AT5G23420.1 Arabidopsis lyrata fgenesh2_kg.6__1935__AT5G23420.1 N 0.000
fgeneshCV_pg.C_scaffold_4000123 Chlorella vulgaris fgeneshCV_pg.C_scaffold_4000123 N 0.000
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.000
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.000
LPERR08G00140 Leersia perrieri LPERR08G00140 N 0.000
MDP0000205665 Malus domestica MDP0000205665 I 0.000
mgf009124m Mimulus guttatus mgf009124m N 0.000
OB08G10120 Oryza brachyantha OB08G10120 N 0.000
OBART08G00070 Oryza barthii OBART08G00070 I 0.000
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.000
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.000
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.000
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.000
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.000
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.000
OS08G0101100 Oryza sativa OS08G0101100 I 0.000
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.000
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.000
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.000
PK03866.1 Cannabis sativa PK03866.1 I 0.000
Pm006054 Prunus mume Pm006054 I 0.000
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.000
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.000
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.000
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.000
scaffold_602413.1 Arabidopsis lyrata scaffold_602413.1 N 0.000
Si014434m.g Setaria italica Si014434m.g N 0.000
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.000
TCM_007659 Theobroma cacao TCM_007659 I 0.000
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N 0.000
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I 0.000
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I 0.000
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I 0.000
TRIUR3_35367 Triticum urartu TRIUR3_35367 I 0.000
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.000