VIT_03s0038g00050 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_03s0038g00050 T224519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.843 0.755
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.626 0.551
MEIS3
M03093_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.602 0.429
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.602 0.429
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.602 0.429
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR

YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.602 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0038g00050.t01 Homeodomain 420 471

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_004430 Acremonium chrysogenum ACRE_004430 I 0.000
Bcin06g06480 Botrytis cinerea Bcin06g06480 I 0.000
A1O1_04664 Capronia coronata A1O1_04664 I 0.000
PV04_08189 Capronia semiimmersa PV04_08189 I 0.000
Z519_05358 Cladophialophora bantiana Z519_05358 I 0.000
G647_02381 Cladophialophora carrionii G647_02381 I 0.000
PV07_11936 Cladophialophora immunda PV07_11936 I 0.000
A1O5_09249 Cladophialophora psammophila A1O5_09249 I 0.000
A1O7_07701 Cladophialophora yegresii A1O7_07701 I 0.000
CGGC5_14308 Colletotrichum gloeosporioides CGGC5_14308 I 0.000
GLRG_08361 Colletotrichum graminicola GLRG_08361 I 0.000
CH063_05452 Colletotrichum higginsianum CH063_05452 I 0.000
CSUB01_02000 Colletotrichum sublineola CSUB01_02000 I 0.000
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I 0.000
EPUS_00089 Endocarpon pusillum EPUS_00089 I 0.000
A1O9_01966 Exophiala aquamarina A1O9_01966 I 0.000
HMPREF1120_01670 Exophiala dermatitidis HMPREF1120_01670 I 0.000
PV06_02589 Exophiala oligosperma PV06_02589 I 0.000
PV11_06331 Exophiala sideris PV11_06331 I 0.000
PV08_11364 Exophiala spinifera PV08_11364 I 0.000
PV05_09089 Exophiala xenobiotica PV05_09089 I 0.000
Z517_03357 Fonsecaea pedrosoi Z517_03357 I 0.000
FFUJ_04435 Fusarium fujikuroi FFUJ_04435 I 0.000
FFUJ_09085 Fusarium fujikuroi FFUJ_09085 I 0.000
FGRRES_17238 Fusarium graminearum FGRRES_17238 D 0.000
FGRRES_17152 Fusarium graminearum FGRRES_17152 D 0.000
FOXG_08967 Fusarium oxysporum FOXG_08967 I 0.000
FOXG_05651 Fusarium oxysporum FOXG_05651 I 0.000
FVEG_06579 Fusarium verticillioides FVEG_06579 I 0.000
FVEG_04119 Fusarium verticillioides FVEG_04119 I 0.000
GGTG_02769 Gaeumannomyces graminis GGTG_02769 I 0.000
CMQ_3175 Grosmannia clavigera CMQ_3175 I 0.000
MAPG_01731 Magnaporthe poae MAPG_01731 I 0.000
MYCTH_122893 Myceliophthora thermophila MYCTH_122893 I 0.000
OIDMADRAFT_141009 Oidiodendron maius OIDMADRAFT_141009 I 0.000
F503_02949 Ophiostoma piceae uamh F503_02949 I 0.000
PDIP_88440 Penicillium digitatum PDIP_88440 I 0.000
Z518_06732 Rhinocladiella mackenziei Z518_06732 I 0.000
SS1G_03098 Sclerotinia sclerotiorum SS1G_03098 I 0.000
SPBR_00057 Sporothrix brasiliensis SPBR_00057 I 0.000
HMPREF1624_05953 Sporothrix schenckii HMPREF1624_05953 I 0.000
TRIREDRAFT_119826 Trichoderma reesei TRIREDRAFT_119826 I 0.000
UV8b_5932 Ustilaginoidea virens UV8b_5932 I 0.000
VDBG_00856 Verticillium albo atrum VDBG_00856 I 0.000
VDBG_00856 Verticillium alfalfae VDBG_00856 I 0.000
VDAG_07897 Verticillium dahliae VDAG_07897 I 0.000
VDAG_00465 Verticillium dahliae VDAG_00465 I 0.000