nsy-7 (Caenorhabditis elegans)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 WBGene00044508 T224681_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables sequence-specific DNA binding activity. Involved in determination of left/right asymmetry in nervous system and negative regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in amphid sheath cell; intestine; and neurons. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nsy-7
M00966_2.00		 Caenorhabditis elegans
TTAAGGBN
NVCCTTAA		 PBM
Lesch et al.(2009)
Nsy-7		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00966_2.00 Homeodomain 191 234

DNA Binding Domains

Protein ID Domain From To Sequence
C18F3.4a Homeodomain 191 234

Links

Other Homeodomain family TFs
Other Caenorhabditis elegans TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HmN_000713700 Hymenolepis microstoma HmN_000713700 I 0.680
ANCDUO_20566 Ancylostoma duodenale ANCDUO_20566 I 0.613