CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMRA1
(
Saccharomyces cerevisiae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
YCR097W
T224758_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables transcription corepressor activity. Involved in regulation of mating-type specific transcription, DNA-templated. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMRA1
M08422_2.00
Saccharomyces cerevisiae
RCACAAT
ATTGTGY
ChIP-chip
Mathelier et al.(2014)
MA0327.1
(Direct)
(Direct)
HMRA1
M10795_2.00
Saccharomyces cerevisiae
TGATGTANHT
ADNYACATCA
Transfac
Matys et al.(2006)
F$MATA1_01
(Direct)
(Direct)
HMRA1
M10796_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MATA1_02
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YCR097W
Homeodomain
71
126
PKGKSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK
Links
Other
Homeodomain
family TFs
Other
Saccharomyces cerevisiae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy