Alligator_sinensis_CCG004678.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG004678.1 T225175_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG004678.1 Homeodomain 46 97

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI008958 Acyrthosiphon pisum ACYPI008958 N 0.619
AAEL009092 Aedes aegypti AAEL009092 N 0.606
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N 0.659
AFAF012002 Anopheles farauti AFAF012002 N 0.600
AGAP001761 Anopheles gambiae AGAP001761 N 0.600
AMEM008456 Anopheles merus AMEM008456 N 0.600
Afo_R008528 Aptenodytes forsteri Afo_R008528 N 0.634
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N 0.737
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N 0.805
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N 0.805
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N 0.640
Cmyd_10017930 Chelonia mydas Cmyd_10017930 N 0.867
CLEC001936 Cimex lectularius CLEC001936 N 0.622
lag1-like1 Ciona intestinalis ENSCING00000006059 N 0.630
ENSCSAVG00000011823 Ciona savignyi ENSCSAVG00000011823 N 0.607
ENSCSAVG00000009299 Ciona savignyi ENSCSAVG00000009299 N 0.622
KGM_16996 Danaus plexippus KGM_16996 N 0.612
cers3b Danio rerio ENSDARG00000036337 N 0.720
ENSGMOG00000018099 Gadus morhua ENSGMOG00000018099 N 0.797
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N 0.756
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N 0.640
HelroG82517 Helobdella robusta HelroG82517 N 0.620
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N 0.654
LDEC003623 Leptinotarsa decemlineata LDEC003623 N 0.620
LotgiG226091 Lottia gigantea LotgiG226091 N 0.708
ENSMGAG00000017003 Meleagris gallopavo ENSMGAG00000017003 N 0.867
MCINX005367 Melitaea cinxia MCINX005367 N 0.652
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N 0.676
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N 0.768
ENSMODG00000004916 Monodelphis domestica ENSMODG00000004916 N 0.635
ENSMODG00000004533 Monodelphis domestica ENSMODG00000004533 N 0.677
ENSMODG00000004875 Monodelphis domestica ENSMODG00000004875 N 0.604
Myotis_brandtii_Lass6_10034918 Myotis brandtii Myotis_brandtii_Lass6_10034918 N 0.867
Ocbimv22016239m.g Octopus bimaculoides Ocbimv22016239m.g N 0.718
ENSONIG00000019701 Oreochromis niloticus ENSONIG00000019701 N 0.781
ENSONIG00000017329 Oreochromis niloticus ENSONIG00000017329 N 0.813
CERS5 Oryzias latipes ENSORLG00000010219 N 0.779
ENSOARG00000017904 Ovis aries ENSOARG00000017904 N 0.795
ENSPMAG00000008848 Petromyzon marinus ENSPMAG00000008848 N 0.819
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N 0.784
RPRC008736 Rhodnius prolixus RPRC008736 N 0.609
Sakowv30024320m.g Saccoglossus kowalevskii Sakowv30024320m.g N 0.599
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N 0.755
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N 0.746
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N 0.743
SINV24013 Solenopsis invicta SINV24013 N 0.653
SINV20227 Solenopsis invicta SINV20227 N 0.630
cers2a Takifugu rubripes ENSTRUG00000012292 N 0.770
CERS5 Takifugu rubripes ENSTRUG00000010435 N 0.750
cers4b Takifugu rubripes ENSTRUG00000000191 N 0.671
CERS5 Tetraodon nigroviridis ENSTNIG00000017897 N 0.802
cers2a Tetraodon nigroviridis ENSTNIG00000017545 N 0.759
AAL89720 Xenopus laevis AAL89720 N 0.796
cers3.L Xenopus laevis XB-GENE-6251639 N 0.694
cers5.S Xenopus laevis XB-GENE-866438 N 0.796
ENSXMAG00000010322 Xiphophorus maculatus ENSXMAG00000010322 N 0.817
L798_00373 Zootermopsis nevadensis L798_00373 N 0.623